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DATA FILES FOR SJPHALL

DATA FILES FOR SJPHALL

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DUO:0000042
version: 2019-01-07

general research use

This data use permission indicates that use is allowed for general research use for any research purpose.

DAC to obtain datasets submitted by St. Jude Children's Research Hospital - Washington University Pediatric Cancer Genome Project

Learn more about the PCGP, disease types, publications, the PCGP Data Access Committee, and instructions to access data via EGA: https://pecan.stjude.cloud/permalink/pcgp Complete the attached Data Access Agreement (DAA), adhering to the following guidance, and return it to pcgpdaccoordinator@stjude.org: - Requests must be made for individual datasets (EGAD ID), not full studies (EGAS ID). - A separate DAA must be submitted for each dataset AND all original pages must be included. - The first listed applicant should be the Principal Investigator, Head of Department, or Department Chair leading the project. This should not be a staff scientist or postdoctoral researcher. - The email address used to access the dataset(s) must be a work-related email, not a personal email. - The signature of the “Institutional or Administrative Authority” must be an individual with the authority to sign documents on behalf of the requesting institution. This individual is known as the Authorized Organizational Representative (AOR) and is typically someone in the requesting institution's legal department or grants office. Heads/Chairs of Departments cannot sign as the Institutional or Administrative Authority. - Not adhering to these policies will delay your application. Once we receive your completed application, the DAC review typically takes approximately 15-20 business days. - If we do not receive a completed DAA from you within 90 days, we will consider this application closed and reject your request in the EGA portal. You may resubmit later as needed.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001000253 Whole Genome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF00000075425 bam 33.0 GB Report
EGAF00000075427 bam 38.4 GB Report
EGAF00000075429 bam 37.0 GB Report
EGAF00000075431 bam 33.1 GB Report
EGAF00000075433 bam 33.1 GB Report
EGAF00000075435 bam 31.1 GB Report
EGAF00000075437 bam 31.7 GB Report
EGAF00000075439 bam 31.5 GB Report
EGAF00000075441 bam 28.2 GB Report
EGAF00000075443 bam 27.5 GB Report
EGAF00000075445 bam 32.0 GB Report
EGAF00000075447 bam 32.1 GB Report
EGAF00000075449 bam 36.5 GB Report
EGAF00000075451 bam 35.9 GB Report
EGAF00000075453 bam 36.5 GB Report
EGAF00000075455 bam 32.8 GB Report
EGAF00000075457 bam 32.6 GB Report
EGAF00000075459 bam 31.0 GB Report
EGAF00000075461 bam 31.0 GB Report
EGAF00000075463 bam 32.9 GB Report
EGAF00000075465 bam 30.7 GB Report
EGAF00000075467 bam 35.4 GB Report
EGAF00000075469 bam 35.2 GB Report
EGAF00000075471 bam 31.6 GB Report
EGAF00000075473 bam 29.1 GB Report
EGAF00000075475 bam 27.8 GB Report
EGAF00000075477 bam 31.2 GB Report
EGAF00000075479 bam 32.2 GB Report
EGAF00000075481 bam 32.5 GB Report
EGAF00000075483 bam 31.5 GB Report
EGAF00000075485 bam 32.9 GB Report
EGAF00000075487 bam 31.9 GB Report
EGAF00000075489 bam 31.3 GB Report
EGAF00000075491 bam 28.2 GB Report
EGAF00000075493 bam 32.1 GB Report
EGAF00000075495 bam 28.3 GB Report
EGAF00000075497 bam 30.5 GB Report
EGAF00000075499 bam 31.2 GB Report
EGAF00000075501 bam 31.4 GB Report
EGAF00000075503 bam 29.3 GB Report
EGAF00000075505 bam 29.8 GB Report
EGAF00000075507 bam 29.3 GB Report
EGAF00000075509 bam 27.1 GB Report
EGAF00000075511 bam 26.7 GB Report
EGAF00000075513 bam 27.4 GB Report
EGAF00000075515 bam 27.3 GB Report
EGAF00000075517 bam 35.8 GB Report
EGAF00000075519 bam 32.8 GB Report
EGAF00000075521 bam 29.3 GB Report
EGAF00000075523 bam 32.9 GB Report
EGAF00000075525 bam 33.8 GB Report
EGAF00000075527 bam 32.2 GB Report
EGAF00000075529 bam 33.2 GB Report
EGAF00000075531 bam 32.2 GB Report
EGAF00000075533 bam 33.1 GB Report
EGAF00000075535 bam 30.8 GB Report
EGAF00000075537 bam 30.9 GB Report
EGAF00000075539 bam 30.3 GB Report
EGAF00000075541 bam 29.8 GB Report
EGAF00000075543 bam 30.2 GB Report
EGAF00000075545 bam 28.0 GB Report
EGAF00000075547 bam 36.6 GB Report
EGAF00000075549 bam 31.1 GB Report
EGAF00000075551 bam 31.0 GB Report
EGAF00000075553 bam 32.7 GB Report
EGAF00000075555 bam 33.1 GB Report
EGAF00000075557 bam 28.5 GB Report
EGAF00000075559 bam 30.0 GB Report
EGAF00000075561 bam 30.0 GB Report
EGAF00000075563 bam 30.5 GB Report
EGAF00000075565 bam 19.7 GB
EGAF00000075567 bam 30.8 GB Report
72 Files (2.3 TB)