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DATA FILES FOR SJHYPO

Hypodiploid acute lymphoblastic leukemia whole genome sequencing

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DUO:0000042
version: 2019-01-07

general research use

This data use permission indicates that use is allowed for general research use for any research purpose.

DAC to obtain datasets submitted by St. Jude Children's Research Hospital - Washington University Pediatric Cancer Genome Project

Learn more about the PCGP, disease types, publications, the PCGP Data Access Committee, and instructions to access data via EGA: https://pecan.stjude.cloud/permalink/pcgp Complete the attached Data Access Agreement (DAA), adhering to the following guidance, and return it to pcgpdaccoordinator@stjude.org: - Requests must be made for individual datasets (EGAD ID), not full studies (EGAS ID). - A separate DAA must be submitted for each dataset AND all original pages must be included. - The first listed applicant should be the Principal Investigator, Head of Department, or Department Chair leading the project. This should not be a staff scientist or postdoctoral researcher. - The email address used to access the dataset(s) must be a work-related email, not a personal email. - The signature of the “Institutional or Administrative Authority” must be an individual with the authority to sign documents on behalf of the requesting institution. This individual is known as the Authorized Organizational Representative (AOR) and is typically someone in the requesting institution's legal department or grants office. Heads/Chairs of Departments cannot sign as the Institutional or Administrative Authority. - Not adhering to these policies will delay your application. Once we receive your completed application, the DAC review typically takes approximately 15-20 business days. - If we do not receive a completed DAA from you within 90 days, we will consider this application closed and reject your request in the EGA portal. You may resubmit later as needed.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001000380 Whole Genome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF00000320036 bam 23.0 GB Report
EGAF00000320037 bam 9.5 GB Report
EGAF00000321874 bam 10.9 GB Report
EGAF00000321875 bam 11.0 GB Report
EGAF00000321876 bam 10.8 GB Report
EGAF00000321877 bam 11.1 GB Report
EGAF00000321878 bam 18.7 GB Report
EGAF00000321879 bam 18.8 GB Report
EGAF00000321880 bam 18.9 GB Report
EGAF00000321881 bam 18.9 GB Report
EGAF00000321882 bam 15.9 GB Report
EGAF00000321883 bam 15.2 GB Report
EGAF00000321884 bam 14.5 GB Report
EGAF00000321885 bam 15.0 GB Report
EGAF00000321886 bam 16.3 GB Report
EGAF00000321887 bam 16.1 GB Report
EGAF00000321888 bam 16.0 GB Report
EGAF00000321889 bam 15.2 GB Report
EGAF00000321890 bam 22.6 GB Report
EGAF00000321891 bam 30.8 GB Report
EGAF00000321892 bam 22.6 GB Report
EGAF00000321893 bam 30.3 GB Report
EGAF00000321894 bam 30.6 GB Report
EGAF00000321895 bam 37.2 GB Report
EGAF00000321896 bam 38.0 GB Report
EGAF00000321897 bam 37.3 GB Report
EGAF00000321898 bam 14.1 GB Report
EGAF00000321899 bam 14.6 GB Report
EGAF00000321900 bam 16.9 GB Report
EGAF00000321901 bam 16.9 GB Report
EGAF00000321902 bam 14.9 GB Report
EGAF00000321903 bam 14.6 GB Report
EGAF00000321904 bam 16.9 GB Report
EGAF00000321905 bam 17.0 GB Report
EGAF00000321906 bam 15.7 GB Report
EGAF00000321907 bam 14.6 GB Report
EGAF00000321908 bam 15.7 GB Report
EGAF00000321909 bam 15.2 GB Report
EGAF00000321910 bam 15.1 GB Report
EGAF00000321911 bam 15.6 GB Report
EGAF00000321912 bam 15.2 GB Report
EGAF00000321913 bam 15.7 GB Report
EGAF00000321914 bam 10.2 GB Report
EGAF00000321915 bam 10.6 GB Report
EGAF00000321916 bam 11.4 GB Report
EGAF00000321917 bam 34.1 GB Report
EGAF00000321918 bam 34.0 GB Report
EGAF00000321919 bam 28.1 GB Report
EGAF00000321920 bam 30.0 GB Report
EGAF00000321921 bam 30.0 GB Report
EGAF00000321922 bam 30.2 GB Report
EGAF00000321923 bam 38.3 GB Report
EGAF00000321924 bam 38.0 GB Report
EGAF00000321925 bam 38.4 GB Report
EGAF00000321926 bam 38.0 GB Report
EGAF00000321927 bam 38.3 GB Report
EGAF00000321928 bam 36.1 GB Report
EGAF00000321929 bam 36.4 GB Report
EGAF00000321930 bam 36.7 GB Report
EGAF00000321931 bam 36.9 GB Report
EGAF00000321932 bam 36.9 GB Report
EGAF00000321933 bam 34.9 GB Report
EGAF00000321934 bam 35.2 GB Report
EGAF00000321935 bam 37.1 GB Report
EGAF00000321936 bam 34.5 GB Report
EGAF00000321937 bam 30.6 GB Report
EGAF00000321938 bam 30.8 GB Report
EGAF00000321939 bam 38.4 GB Report
EGAF00000321940 bam 37.7 GB Report
EGAF00000321941 bam 36.9 GB Report
EGAF00000321942 bam 37.4 GB Report
EGAF00000321943 bam 35.8 GB Report
EGAF00000321944 bam 37.1 GB Report
EGAF00000321945 bam 37.6 GB Report
EGAF00000321946 bam 36.7 GB Report
EGAF00000321947 bam 36.8 GB Report
EGAF00000321948 bam 37.6 GB Report
EGAF00000321949 bam 37.2 GB Report
EGAF00000321950 bam 37.6 GB Report
EGAF00000321951 bam 37.3 GB Report
EGAF00000321952 bam 19.8 GB Report
EGAF00000321953 bam 20.1 GB Report
EGAF00000321954 bam 21.3 GB Report
EGAF00000321955 bam 25.7 GB Report
EGAF00000321956 bam 22.0 GB Report
EGAF00000321957 bam 18.7 GB Report
EGAF00000321958 bam 18.7 GB Report
EGAF00000321959 bam 18.5 GB Report
EGAF00000321960 bam 22.3 GB Report
EGAF00000321961 bam 24.2 GB Report
EGAF00000321962 bam 23.5 GB Report
EGAF00000321963 bam 24.4 GB Report
EGAF00000321964 bam 26.8 GB Report
EGAF00000321965 bam 36.1 GB Report
EGAF00000321966 bam 34.2 GB Report
EGAF00000321967 bam 36.6 GB Report
EGAF00000321968 bam 36.3 GB Report
EGAF00000321969 bam 34.5 GB Report
EGAF00000321970 bam 28.9 GB Report
EGAF00000321971 bam 33.2 GB Report
EGAF00000321972 bam 33.6 GB Report
EGAF00000321973 bam 34.2 GB Report
EGAF00000321974 bam 34.4 GB Report
EGAF00000321975 bam 29.6 GB Report
EGAF00000321976 bam 33.6 GB Report
EGAF00000321977 bam 29.5 GB Report
EGAF00000321978 bam 32.3 GB Report
EGAF00000321979 bam 32.0 GB Report
EGAF00000321980 bam 31.4 GB Report
EGAF00000321981 bam 21.4 GB Report
EGAF00000321982 bam 21.8 GB Report
EGAF00000321983 bam 23.9 GB Report
EGAF00000321984 bam 25.4 GB Report
EGAF00000321985 bam 26.6 GB Report
EGAF00000321986 bam 25.2 GB Report
EGAF00000321987 bam 32.5 GB Report
EGAF00000321988 bam 33.0 GB Report
EGAF00000321989 bam 6.8 GB Report
EGAF00000321990 bam 7.0 GB Report
EGAF00000321991 bam 7.9 GB Report
EGAF00000321992 bam 11.1 GB Report
EGAF00000321993 bam 11.1 GB Report
EGAF00000321994 bam 17.3 GB Report
EGAF00000321995 bam 8.0 GB Report
EGAF00000321996 bam 17.4 GB Report
EGAF00000321997 bam 16.1 GB Report
EGAF00000321998 bam 17.0 GB Report
EGAF00000321999 bam 9.0 GB Report
EGAF00000322000 bam 9.2 GB Report
EGAF00000322001 bam 8.9 GB Report
EGAF00000322002 bam 10.2 GB Report
EGAF00000322003 bam 9.0 GB Report
EGAF00000322004 bam 10.0 GB Report
EGAF00000322005 bam 10.1 GB Report
EGAF00000322006 bam 10.0 GB Report
EGAF00000322007 bam 15.1 GB Report
EGAF00000322008 bam 12.4 GB Report
EGAF00000322009 bam 14.8 GB Report
EGAF00000322010 bam 15.4 GB Report
EGAF00000322011 bam 12.3 GB Report
EGAF00000322012 bam 12.3 GB Report
EGAF00000322013 bam 15.3 GB Report
EGAF00000322014 bam 12.4 GB Report
EGAF00000322015 bam 11.6 GB Report
EGAF00000322016 bam 11.7 GB Report
EGAF00000322017 bam 12.3 GB Report
EGAF00000322018 bam 12.4 GB Report
EGAF00000322019 bam 14.2 GB Report
EGAF00000322020 bam 17.4 GB Report
EGAF00000322021 bam 17.9 GB Report
EGAF00000322022 bam 11.5 GB Report
EGAF00000322023 bam 11.8 GB Report
EGAF00000322024 bam 11.4 GB Report
EGAF00000322025 bam 9.7 GB Report
EGAF00000322026 bam 9.8 GB Report
EGAF00000322027 bam 9.5 GB Report
EGAF00000322028 bam 11.1 GB Report
EGAF00000322029 bam 10.1 GB Report
EGAF00000322030 bam 39.1 GB Report
EGAF00000322031 bam 11.4 GB Report
EGAF00000322032 bam 10.4 GB Report
EGAF00000322033 bam 10.7 GB Report
EGAF00000322034 bam 11.3 GB Report
EGAF00000322035 bam 10.5 GB Report
EGAF00000322036 bam 10.6 GB Report
EGAF00000322037 bam 11.3 GB Report
EGAF00000322038 bam 11.5 GB Report
EGAF00000322039 bam 29.5 GB Report
EGAF00000322040 bam 29.5 GB Report
EGAF00000322041 bam 32.4 GB Report
EGAF00000322042 bam 32.1 GB Report
EGAF00000322043 bam 29.8 GB Report
EGAF00000322044 bam 24.5 GB Report
EGAF00000322045 bam 31.8 GB Report
EGAF00000322046 bam 32.6 GB Report
EGAF00000322047 bam 15.2 GB Report
EGAF00000322048 bam 15.0 GB Report
EGAF00000322049 bam 23.4 GB Report
EGAF00000322050 bam 22.8 GB Report
EGAF00000322051 bam 18.5 GB Report
EGAF00000322052 bam 25.6 GB Report
EGAF00000322053 bam 24.5 GB Report
EGAF00000322054 bam 9.4 GB Report
EGAF00000322055 bam 8.7 GB Report
EGAF00000322056 bam 9.4 GB Report
EGAF00000322057 bam 9.5 GB Report
EGAF00000322058 bam 14.0 GB Report
EGAF00000322059 bam 13.5 GB Report
EGAF00000322060 bam 13.2 GB Report
EGAF00000322061 bam 13.6 GB Report
EGAF00000322062 bam 14.6 GB Report
EGAF00000322063 bam 16.9 GB Report
EGAF00000322064 bam 19.6 GB Report
EGAF00000322065 bam 18.7 GB Report
EGAF00000322066 bam 16.7 GB Report
EGAF00000322067 bam 19.1 GB Report
EGAF00000322068 bam 16.9 GB Report
EGAF00000322069 bam 19.4 GB Report
EGAF00000322070 bam 16.9 GB Report
EGAF00000322071 bam 13.2 GB Report
EGAF00000322072 bam 17.3 GB Report
EGAF00000322073 bam 17.2 GB Report
EGAF00000322074 bam 12.8 GB Report
EGAF00000322075 bam 12.8 GB Report
EGAF00000322076 bam 13.0 GB Report
EGAF00000322077 bam 17.4 GB Report
EGAF00000322078 bam 17.3 GB Report
EGAF00000322079 bam 16.4 GB Report
EGAF00000322080 bam 16.3 GB Report
EGAF00000322081 bam 16.5 GB Report
EGAF00000322082 bam 16.7 GB Report
EGAF00000322083 bam 16.3 GB Report
EGAF00000322084 bam 16.1 GB Report
EGAF00000322085 bam 16.3 GB Report
EGAF00000322086 bam 16.3 GB Report
EGAF00000322087 bam 12.2 GB Report
EGAF00000322088 bam 12.2 GB Report
EGAF00000322089 bam 12.5 GB Report
EGAF00000322090 bam 12.4 GB Report
EGAF00000322091 bam 19.4 GB Report
EGAF00000322092 bam 19.2 GB Report
EGAF00000322093 bam 19.0 GB Report
EGAF00000322094 bam 19.2 GB Report
EGAF00000322095 bam 14.1 GB Report
EGAF00000322096 bam 10.6 GB Report
EGAF00000322097 bam 10.7 GB Report
EGAF00000322098 bam 12.0 GB Report
EGAF00000322099 bam 12.2 GB Report
EGAF00000322100 bam 14.5 GB Report
EGAF00000322101 bam 14.8 GB Report
EGAF00000322102 bam 14.9 GB Report
231 Files (4.8 TB)