About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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SCAT_Osteosarcoma_Validation

This experiment is to validate putative somatic substitutions and indels identified in an exome screen of ~50 osteosarcoma tumour/normal pairs. It is the first stage in our ICGC commitment to study osteosarcoma. The validation process is an important component of our analysis to clarify the data prior to looking for evidence of new cancer genes, or subverted pathways important in the development of cancer. This data is part of a pre-publication release. For information on the proper use of pre-publication data shared by the Wellcome Trust Sanger Institute (including details of any publication moratoria), please see http://www.sanger.ac.uk/datasharing/

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http://www.icgc.org/icgc/goals-structure-policies-guidelines/e1-informed-consent-access-and-ethical-oversight

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001000196 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00000137602 bam 302.5 MB Report
EGAF00000137603 bam 232.0 MB Report
EGAF00000137604 bam 385.9 MB Report
EGAF00000137605 bam 274.8 MB Report
EGAF00000137606 bam 263.5 MB Report
EGAF00000137607 bam 272.5 MB Report
EGAF00000137608 bam 217.8 MB Report
EGAF00000137609 bam 283.4 MB Report
EGAF00000137610 bam 271.0 MB Report
EGAF00000137611 bam 392.2 MB Report
EGAF00000137612 bam 253.9 MB Report
EGAF00000137613 bam 254.7 MB Report
EGAF00000137614 bam 329.7 MB Report
EGAF00000137615 bam 381.0 MB Report
EGAF00000137616 bam 419.8 MB Report
EGAF00000137617 bam 354.8 MB Report
EGAF00000137618 bam 338.6 MB Report
EGAF00000137619 bam 216.1 MB Report
EGAF00000137620 bam 257.7 MB Report
EGAF00000137621 bam 488.0 MB Report
EGAF00000137622 bam 148.2 MB Report
EGAF00000137623 bam 295.8 MB Report
EGAF00000137624 bam 901.3 MB Report
EGAF00000137625 bam 171.9 MB Report
EGAF00000137626 bam 144.8 MB Report
EGAF00000137627 bam 267.7 MB Report
EGAF00000137628 bam 281.1 MB Report
EGAF00000137629 bam 247.5 MB Report
EGAF00000137630 bam 128.4 MB Report
EGAF00000137631 bam 251.2 MB Report
EGAF00000137632 bam 468.1 MB Report
EGAF00000137633 bam 77.9 MB Report
EGAF00000137634 bam 76.0 MB Report
EGAF00000137635 bam 387.6 MB Report
EGAF00000137636 bam 363.7 MB Report
EGAF00000137637 bam 270.1 MB Report
EGAF00000137638 bam 262.3 MB Report
EGAF00000137639 bam 128.1 MB Report
EGAF00000137640 bam 195.8 MB Report
EGAF00000137641 bam 274.0 MB Report
EGAF00000137642 bam 242.3 MB Report
EGAF00000137643 bam 262.9 MB Report
EGAF00000137644 bam 269.3 MB Report
EGAF00000137645 bam 250.0 MB Report
EGAF00000137646 bam 270.2 MB Report
EGAF00000137647 bam 304.0 MB Report
EGAF00000137648 bam 298.4 MB Report
EGAF00000137649 bam 327.9 MB Report
EGAF00000137650 bam 349.3 MB Report
EGAF00000137651 bam 317.6 MB Report
EGAF00000137652 bam 290.7 MB Report
EGAF00000137653 bam 301.8 MB Report
EGAF00000137654 bam 337.1 MB Report
EGAF00000137655 bam 387.2 MB Report
EGAF00000137656 bam 384.2 MB Report
EGAF00000137657 bam 342.4 MB Report
EGAF00000140874 bam 179.7 MB Report
EGAF00000140875 bam 170.5 MB Report
EGAF00000140876 bam 126.1 MB Report
EGAF00000140877 bam 105.1 MB Report
EGAF00000140878 bam 347.5 MB Report
EGAF00000140879 bam 172.2 MB Report
EGAF00000140880 bam 179.0 MB Report
EGAF00000140881 bam 203.3 MB Report
EGAF00000140882 bam 181.0 MB Report
EGAF00000140883 bam 149.5 MB Report
EGAF00000140884 bam 352.3 MB Report
EGAF00000140885 bam 183.1 MB Report
EGAF00000140886 bam 239.7 MB Report
EGAF00000140887 bam 208.5 MB Report
EGAF00000140888 bam 294.1 MB Report
EGAF00000140889 bam 187.6 MB Report
EGAF00000140890 bam 192.2 MB Report
EGAF00000140891 bam 249.2 MB Report
EGAF00000140892 bam 148.5 MB Report
EGAF00000140893 bam 282.6 MB Report
EGAF00000140894 bam 252.5 MB Report
EGAF00000140895 bam 274.1 MB Report
EGAF00000140896 bam 159.8 MB Report
EGAF00000140897 bam 194.1 MB Report
EGAF00000140898 bam 250.6 MB Report
EGAF00000140899 bam 120.5 MB Report
EGAF00000140900 bam 225.1 MB Report
EGAF00000140901 bam 245.7 MB Report
EGAF00000140902 bam 175.8 MB Report
EGAF00000140903 bam 295.7 MB Report
EGAF00000140904 bam 273.3 MB Report
EGAF00000140905 bam 132.2 MB Report
EGAF00000140906 bam 330.4 MB Report
EGAF00000140907 bam 178.2 MB Report
EGAF00000140908 bam 283.7 MB Report
EGAF00000140909 bam 152.4 MB Report
EGAF00000140910 bam 176.2 MB Report
EGAF00000140911 bam 189.0 MB Report
EGAF00000140912 bam 181.4 MB Report
EGAF00000140913 bam 240.3 MB Report
EGAF00000140914 bam 288.4 MB Report
EGAF00000140915 bam 353.0 MB Report
EGAF00000140916 bam 314.1 MB Report
EGAF00000140917 bam 569.3 MB Report
EGAF00000140918 bam 445.9 MB Report
EGAF00000140919 bam 341.0 MB Report
EGAF00000140920 bam 355.1 MB Report
EGAF00000140921 bam 217.1 MB Report
EGAF00000140922 bam 130.8 MB Report
EGAF00000140923 bam 336.5 MB Report
EGAF00000140924 bam 213.5 MB Report
EGAF00000140925 bam 207.4 MB Report
EGAF00000140926 bam 277.1 MB Report
EGAF00000140927 bam 331.9 MB Report
EGAF00000140928 bam 207.5 MB Report
EGAF00000140929 bam 202.6 MB Report
112 Files (29.7 GB)