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Copy number profiling using PlasmaSeq

In order to establish copy number profiles from the various samples we prepared libraries and subjected them to whole-genome sequencing at a shallow sequencing depth (0.1x)

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CTC - Plasma-DNA - MONDO:0007254

European Genome-Phenome Archive c/o European Bioinformatics Institute Wellcome Trust Genome Campus Hinxton Cambridge CB10 1SD United Kingdom To whom it may concern, This document refers to datasets with MONDO:0007254 which has been submitted to the European Genome Archive (EGA) for the restricted access by legitimate academic institutions that have agreed to comply with the terms of a Data Access Agreement drafted by Ellen Heitzer. There are a number of steps that a researcher must take to obtain access to this data and the process is overseen by Ellen Heitzer Ellen Heitzer is a Postdoctoral Fellow and is authorized to approve researchers to have encrypted access to the data submitted to the EGA. Please be advised that Ellen Heitzer ( is authorized to upload data to the EGA for archiving and distribution as part of your submission process, which will enable approved researchers to have encrypted access to the data. We can confirm that this submission is consistent with the informed consent of the participants of the study or has been granted ethical approval and is in accordance with the applicable laws and regulations. Sincerely, Michael R. Speicher Principle Investigator

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001000625 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00000502761 fastq.gz 1.2 GB
EGAF00000502762 fastq.gz 443.9 MB
EGAF00000502763 fastq.gz 554.7 MB
EGAF00000502764 fastq.gz 787.6 MB
EGAF00000502765 fastq.gz 325.7 MB
EGAF00000502766 fastq.gz 431.3 MB
EGAF00000502767 fastq.gz 612.8 MB
EGAF00000502768 fastq.gz 197.6 MB
EGAF00000502769 fastq.gz 167.2 MB
EGAF00000502770 fastq.gz 379.4 MB
EGAF00000502771 fastq.gz 109.8 MB
EGAF00000502772 fastq.gz 82.4 MB
EGAF00000502773 fastq.gz 470.4 MB
EGAF00000502774 fastq.gz 550.6 MB
14 Files (6.4 GB)