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Exome sequencing of tumor samples

We utilized exome sequencing for DNA obtained from saliva (germline DNA) and the four spatially separated tumor foci and 3 corresponding lymph node metastases

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CTC - Plasma-DNA - MONDO:0007254

European Genome-Phenome Archive c/o European Bioinformatics Institute Wellcome Trust Genome Campus Hinxton Cambridge CB10 1SD United Kingdom To whom it may concern, This document refers to datasets with MONDO:0007254 which has been submitted to the European Genome Archive (EGA) for the restricted access by legitimate academic institutions that have agreed to comply with the terms of a Data Access Agreement drafted by Ellen Heitzer. There are a number of steps that a researcher must take to obtain access to this data and the process is overseen by Ellen Heitzer Ellen Heitzer is a Postdoctoral Fellow and is authorized to approve researchers to have encrypted access to the data submitted to the EGA. Please be advised that Ellen Heitzer ( is authorized to upload data to the EGA for archiving and distribution as part of your submission process, which will enable approved researchers to have encrypted access to the data. We can confirm that this submission is consistent with the informed consent of the participants of the study or has been granted ethical approval and is in accordance with the applicable laws and regulations. Sincerely, Michael R. Speicher Principle Investigator

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001000625 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00000502775 fastq.gz 2.1 GB
EGAF00000502776 fastq.gz 2.1 GB
EGAF00000502777 fastq.gz 1.8 GB
EGAF00000502778 fastq.gz 1.8 GB
EGAF00000502779 fastq.gz 2.7 GB
EGAF00000502780 fastq.gz 2.8 GB
EGAF00000502781 fastq.gz 2.5 GB
EGAF00000502782 fastq.gz 2.5 GB
EGAF00000502783 fastq.gz 1.7 GB
EGAF00000502784 fastq.gz 1.7 GB
EGAF00000502785 fastq.gz 1.8 GB
EGAF00000502786 fastq.gz 1.8 GB
EGAF00000502787 fastq.gz 1.5 GB
EGAF00000502788 fastq.gz 1.5 GB
EGAF00000502789 fastq.gz 6.5 GB
EGAF00000502790 fastq.gz 6.6 GB
16 Files (41.1 GB)