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DATA FILES FOR SJEPD

DATA FILES FOR SJEPD

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DUO:0000042
version: 2019-01-07

general research use

This data use permission indicates that use is allowed for general research use for any research purpose.

DAC to obtain datasets submitted by St. Jude Children's Research Hospital - Washington University Pediatric Cancer Genome Project

Learn more about the PCGP, disease types, publications, the PCGP Data Access Committee, and instructions to access data via EGA: https://pecan.stjude.cloud/permalink/pcgp Complete the attached Data Access Agreement (DAA), adhering to the following guidance, and return it to pcgpdaccoordinator@stjude.org: - Requests must be made for individual datasets (EGAD ID), not full studies (EGAS ID). - A separate DAA must be submitted for each dataset AND all original pages must be included. - The first listed applicant should be the Principal Investigator, Head of Department, or Department Chair leading the project. This should not be a staff scientist or postdoctoral researcher. - The email address used to access the dataset(s) must be a work-related email, not a personal email. - The signature of the “Institutional or Administrative Authority” must be an individual with the authority to sign documents on behalf of the requesting institution. This individual is known as the Authorized Organizational Representative (AOR) and is typically someone in the requesting institution's legal department or grants office. Heads/Chairs of Departments cannot sign as the Institutional or Administrative Authority. - Not adhering to these policies will delay your application. Once we receive your completed application, the DAC review typically takes approximately 15-20 business days. - If we do not receive a completed DAA from you within 90 days, we will consider this application closed and reject your request in the EGA portal. You may resubmit later as needed.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001000254 Whole Genome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF00000530924 bam 34.8 GB Report
EGAF00000530925 bam 34.6 GB Report
EGAF00000530926 bam 33.9 GB Report
EGAF00000530927 bam 36.6 GB Report
EGAF00000530928 bam 36.8 GB Report
EGAF00000530929 bam 34.4 GB Report
EGAF00000530930 bam 35.8 GB Report
EGAF00000530931 bam 35.8 GB Report
EGAF00000530932 bam 38.1 GB Report
EGAF00000530933 bam 37.9 GB Report
EGAF00000530934 bam 37.1 GB Report
EGAF00000530935 bam 38.0 GB Report
EGAF00000530936 bam 37.2 GB Report
EGAF00000530937 bam 37.9 GB Report
EGAF00000530938 bam 39.6 GB Report
EGAF00000530939 bam 38.0 GB Report
EGAF00000530940 bam 39.8 GB Report
EGAF00000530941 bam 42.2 GB Report
EGAF00000530942 bam 42.0 GB Report
EGAF00000530943 bam 42.4 GB Report
EGAF00000530944 bam 39.8 GB Report
EGAF00000530945 bam 38.8 GB Report
EGAF00000530946 bam 38.8 GB Report
EGAF00000530947 bam 35.9 GB Report
EGAF00000530948 bam 35.8 GB Report
EGAF00000530949 bam 36.2 GB Report
EGAF00000530950 bam 38.0 GB Report
EGAF00000530951 bam 37.5 GB Report
EGAF00000530952 bam 36.3 GB Report
EGAF00000530953 bam 36.1 GB Report
EGAF00000530954 bam 34.2 GB Report
EGAF00000530955 bam 34.9 GB Report
EGAF00000530956 bam 36.6 GB Report
EGAF00000530957 bam 42.5 GB Report
EGAF00000530958 bam 42.4 GB Report
EGAF00000530959 bam 39.6 GB Report
EGAF00000530960 bam 39.9 GB Report
EGAF00000530961 bam 38.2 GB Report
EGAF00000530962 bam 39.6 GB Report
EGAF00000530963 bam 37.7 GB Report
EGAF00000530964 bam 40.6 GB Report
EGAF00000530965 bam 39.0 GB Report
EGAF00000530966 bam 40.4 GB Report
EGAF00000530967 bam 39.1 GB Report
EGAF00000530968 bam 42.1 GB Report
EGAF00000530969 bam 38.3 GB Report
EGAF00000530970 bam 41.8 GB Report
EGAF00000530971 bam 42.9 GB Report
EGAF00000530972 bam 38.6 GB Report
EGAF00000530973 bam 38.9 GB Report
EGAF00000530974 bam 39.2 GB Report
EGAF00000530975 bam 38.8 GB Report
EGAF00000530976 bam 39.5 GB Report
EGAF00000530977 bam 38.2 GB Report
EGAF00000530978 bam 37.5 GB Report
EGAF00000530979 bam 37.8 GB Report
EGAF00000530980 bam 35.2 GB Report
EGAF00000530981 bam 35.4 GB Report
EGAF00000530982 bam 34.4 GB Report
EGAF00000530983 bam 34.5 GB Report
EGAF00000530984 bam 34.3 GB Report
EGAF00000530985 bam 34.3 GB Report
EGAF00000530986 bam 35.9 GB Report
EGAF00000530987 bam 34.3 GB Report
EGAF00000530988 bam 38.0 GB Report
EGAF00000530989 bam 37.9 GB Report
EGAF00000530990 bam 35.5 GB Report
EGAF00000530991 bam 35.7 GB Report
EGAF00000530992 bam 35.8 GB Report
EGAF00000530993 bam 36.5 GB Report
EGAF00000530994 bam 36.7 GB Report
EGAF00000530995 bam 31.9 GB Report
EGAF00000530996 bam 32.1 GB Report
EGAF00000530997 bam 36.7 GB Report
EGAF00000530998 bam 36.7 GB Report
EGAF00000530999 bam 31.8 GB Report
EGAF00000531000 bam 31.2 GB Report
EGAF00000531001 bam 25.9 GB Report
EGAF00000531002 bam 30.6 GB Report
EGAF00000531003 bam 29.2 GB Report
EGAF00000531004 bam 32.7 GB Report
EGAF00000531005 bam 37.6 GB Report
EGAF00000531006 bam 28.3 GB Report
EGAF00000531007 bam 29.8 GB Report
EGAF00000531008 bam 31.8 GB Report
EGAF00000531009 bam 37.1 GB Report
EGAF00000531010 bam 36.8 GB Report
EGAF00000531011 bam 39.5 GB Report
EGAF00000531012 bam 38.5 GB Report
EGAF00000531013 bam 39.3 GB Report
EGAF00000531014 bam 2.6 GB
EGAF00000531015 bam 36.7 GB Report
EGAF00000531016 bam 36.5 GB Report
EGAF00000531017 bam 35.5 GB Report
EGAF00000531018 bam 33.8 GB Report
EGAF00000531019 bam 35.7 GB Report
EGAF00000531020 bam 33.9 GB Report
EGAF00000531021 bam 33.7 GB Report
EGAF00000531022 bam 36.6 GB Report
EGAF00000531023 bam 37.8 GB Report
EGAF00000531024 bam 37.8 GB Report
EGAF00000531025 bam 38.5 GB Report
EGAF00000531026 bam 38.7 GB Report
EGAF00000531027 bam 38.9 GB Report
EGAF00000531028 bam 39.2 GB Report
EGAF00000531029 bam 38.6 GB Report
EGAF00000531030 bam 36.5 GB Report
EGAF00000531031 bam 39.0 GB Report
EGAF00000531032 bam 39.9 GB Report
EGAF00000531033 bam 41.0 GB Report
EGAF00000531034 bam 41.6 GB Report
EGAF00000531035 bam 29.7 GB Report
EGAF00000531036 bam 37.8 GB Report
EGAF00000531037 bam 30.5 GB Report
EGAF00000531038 bam 35.8 GB Report
EGAF00000531039 bam 37.4 GB Report
EGAF00000531040 bam 36.7 GB Report
EGAF00000531041 bam 37.6 GB Report
EGAF00000531042 bam 38.9 GB Report
EGAF00000531043 bam 39.6 GB Report
EGAF00000531044 bam 39.1 GB Report
EGAF00000531045 bam 39.7 GB Report
EGAF00000531046 bam 35.8 GB Report
EGAF00000531047 bam 35.8 GB Report
EGAF00000531048 bam 38.1 GB Report
EGAF00000531049 bam 38.1 GB Report
EGAF00000531050 bam 37.7 GB Report
EGAF00000531051 bam 37.1 GB Report
EGAF00000531052 bam 37.0 GB Report
EGAF00000531053 bam 37.9 GB Report
EGAF00000531054 bam 38.2 GB Report
EGAF00000531055 bam 38.2 GB Report
EGAF00000531056 bam 37.7 GB Report
EGAF00000531057 bam 38.1 GB Report
EGAF00000531058 bam 37.7 GB Report
EGAF00000531059 bam 35.0 GB Report
EGAF00000531060 bam 36.1 GB Report
EGAF00000531061 bam 34.9 GB Report
EGAF00000531062 bam 34.8 GB Report
EGAF00000531063 bam 36.1 GB Report
EGAF00000531064 bam 33.1 GB Report
EGAF00000531065 bam 31.5 GB Report
EGAF00000531066 bam 32.9 GB Report
EGAF00000531067 bam 35.0 GB Report
EGAF00000531068 bam 35.7 GB Report
EGAF00000531069 bam 34.6 GB Report
EGAF00000531070 bam 35.5 GB Report
EGAF00000531071 bam 33.0 GB Report
EGAF00000531072 bam 33.7 GB Report
EGAF00000531073 bam 36.4 GB Report
EGAF00000531074 bam 36.2 GB Report
151 Files (5.5 TB)