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DATA FILES FOR SJEPD

DATA FILES FOR SJEPD

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DUO:0000042
version: 2019-01-07

general research use

This data use permission indicates that use is allowed for general research use for any research purpose.

DAC to obtain datasets submitted by St. Jude Children's Research Hospital - Washington University Pediatric Cancer Genome Project

Learn more about the PCGP, disease types, publications, the PCGP Data Access Committee, and instructions to access data via EGA: https://pecan.stjude.cloud/permalink/pcgp Complete the attached Data Access Agreement (DAA), adhering to the following guidance, and return it to pcgpdaccoordinator@stjude.org: - Requests must be made for individual datasets (EGAD ID), not full studies (EGAS ID). - A separate DAA must be submitted for each dataset AND all original pages must be included. - The first listed applicant should be the Principal Investigator, Head of Department, or Department Chair leading the project. This should not be a staff scientist or postdoctoral researcher. - The email address used to access the dataset(s) must be a work-related email, not a personal email. - The signature of the “Institutional or Administrative Authority” must be an individual with the authority to sign documents on behalf of the requesting institution. This individual is known as the Authorized Organizational Representative (AOR) and is typically someone in the requesting institution's legal department or grants office. Heads/Chairs of Departments cannot sign as the Institutional or Administrative Authority. - Not adhering to these policies will delay your application. Once we receive your completed application, the DAC review typically takes approximately 15-20 business days. - If we do not receive a completed DAA from you within 90 days, we will consider this application closed and reject your request in the EGA portal. You may resubmit later as needed.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001000254 Whole Genome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF00000531075 bam 24.6 GB Report
EGAF00000531076 bam 6.7 GB Report
EGAF00000531077 bam 5.4 GB Report
EGAF00000531078 bam 9.8 GB Report
EGAF00000531079 bam 8.2 GB Report
EGAF00000531080 bam 8.3 GB Report
EGAF00000531081 bam 9.8 GB Report
EGAF00000531082 bam 8.0 GB Report
EGAF00000531083 bam 8.0 GB Report
EGAF00000531084 bam 8.6 GB Report
EGAF00000531085 bam 9.0 GB Report
EGAF00000531086 bam 9.0 GB Report
EGAF00000531087 bam 9.6 GB Report
EGAF00000531088 bam 9.3 GB Report
EGAF00000531089 bam 8.7 GB Report
EGAF00000531090 bam 9.5 GB Report
EGAF00000531091 bam 7.8 GB Report
EGAF00000531092 bam 7.5 GB Report
EGAF00000531093 bam 9.2 GB Report
EGAF00000531094 bam 3.4 GB Report
EGAF00000531095 bam 3.6 GB Report
EGAF00000531096 bam 3.0 GB Report
EGAF00000531097 bam 7.7 GB Report
EGAF00000531098 bam 4.2 GB Report
EGAF00000531099 bam 6.1 GB Report
EGAF00000531100 bam 10.2 GB Report
EGAF00000531101 bam 7.1 GB Report
EGAF00000531102 bam 5.0 GB Report
EGAF00000531103 bam 7.0 GB Report
EGAF00000531104 bam 2.6 GB Report
EGAF00000531105 bam 4.5 GB Report
EGAF00000531106 bam 7.4 GB Report
EGAF00000531107 bam 6.9 GB Report
EGAF00000531108 bam 6.8 GB Report
EGAF00000531109 bam 8.2 GB Report
EGAF00000531110 bam 8.3 GB Report
EGAF00000531111 bam 12.0 GB Report
EGAF00000531112 bam 10.2 GB Report
EGAF00000531113 bam 11.4 GB Report
EGAF00000531114 bam 11.8 GB Report
EGAF00000531115 bam 10.0 GB Report
EGAF00000531116 bam 10.3 GB Report
EGAF00000531117 bam 11.8 GB Report
EGAF00000531118 bam 14.1 GB Report
EGAF00000531119 bam 8.5 GB Report
EGAF00000531120 bam 12.6 GB Report
EGAF00000531121 bam 6.9 GB Report
EGAF00000531122 bam 6.8 GB Report
EGAF00000531123 bam 12.2 GB Report
EGAF00000531124 bam 12.9 GB Report
EGAF00000531125 bam 11.0 GB Report
EGAF00000531126 bam 9.6 GB Report
EGAF00000531127 bam 14.5 GB Report
EGAF00000531128 bam 8.8 GB Report
EGAF00000531129 bam 16.3 GB Report
EGAF00000531130 bam 11.8 GB Report
EGAF00000531131 bam 11.0 GB Report
EGAF00000531132 bam 8.5 GB Report
EGAF00000531133 bam 8.3 GB Report
EGAF00000531134 bam 9.2 GB Report
EGAF00000531135 bam 8.9 GB Report
EGAF00000531136 bam 6.3 GB Report
EGAF00000531137 bam 6.2 GB Report
EGAF00000531138 bam 11.0 GB Report
EGAF00000531139 bam 10.8 GB Report
EGAF00000531140 bam 8.9 GB Report
EGAF00000531141 bam 8.7 GB Report
EGAF00000531142 bam 8.9 GB Report
EGAF00000531143 bam 8.9 GB Report
EGAF00000531144 bam 9.3 GB Report
EGAF00000531145 bam 7.8 GB Report
EGAF00000531146 bam 9.6 GB Report
EGAF00000531147 bam 10.5 GB Report
EGAF00000531148 bam 8.6 GB Report
EGAF00000531149 bam 10.1 GB Report
EGAF00000531150 bam 8.0 GB Report
EGAF00000531151 bam 10.5 GB Report
EGAF00000531152 bam 9.9 GB Report
EGAF00000531153 bam 9.0 GB Report
EGAF00000531154 bam 6.9 GB Report
EGAF00000531155 bam 9.3 GB Report
EGAF00000531156 bam 7.7 GB Report
EGAF00000531157 bam 9.0 GB Report
83 Files (744.4 GB)