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Cancer-Normal chronic myeloid leukaemia sequencing data for "A comparative analysis of algorithms for somatic SNV detection in cancer", Bioinformatics 29 (2013) 2223

This dataset contains the fastq sequencing data collected from bone marrow DNA of a chronic myeloid leukaemia patient at time of diagnosis.

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Access Policy Document for SA Pathology

European Bioinformatics Institute European Molecular Biology LaboratoryWellcome Trust Genome CampusHinxton, Cambridge, CB10 1SDUnited KingdomDAC Name: EGAC00001000220DAC Accession: ena-DAC-sacgf-04-08-2014-07:09:22:971-98This document specifies the policy for granting access to the European Genome-phenome Archive (EGA) secure Web based tools for managing data access permissions to the data stored in the EGA database. Access is granted to those Data Access Committee members named in this document by Paul Flicek, head of Genes, Genomes and Variation.Conditions of access:The account holder will abide by all current and future policies of the EBI for computer use as well as computer use policies of the European Molecular Biology Laboratory (EMBL), of which the EBI is a part. All EGA specific policies and standard operating procedures (SOPs) must also be followed. All applicable policies will be provided to the authorized users. Method of access:The EBI will create a personal account for the authorized person. The account username and password together with a RSA key provide access to the secure EGA infrastructure. A separate document with detailed guidelines on how to access and use these tools is provided to each account holder. The EGA helpdesk provides training when needed.Review:All individuals access to the EGA user authorization tools will be reviewed annually by Paul Flicek. Any staff changes affecting the authorized person must be provided immediately to Paul Flicek ( Data Access Committee user:Dr. A. W. SchreiberACRF Cancer Genomics Facility, Centre for Cancer BiologySA PathologyFrome Road, Adelaide SA of authorized user indicating that this policy has been read and understood.Supervisor of Authorized user:Prof Hamish S. Scott , BSc (Hons), PhD, FFSc (RCPA)Director, ACRF Cancer Genomics supervisor of authorized user indicating that this policy has been read and understood

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001000927 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00000586609 fastq.gz 2.2 GB
EGAF00000586610 fastq.gz 2.2 GB
EGAF00000586611 fastq.gz 2.3 GB
EGAF00000586612 fastq.gz 2.3 GB
EGAF00000586613 fastq.gz 2.4 GB
EGAF00000586614 fastq.gz 2.4 GB
EGAF00000586615 fastq.gz 2.5 GB
EGAF00000586616 fastq.gz 2.4 GB
8 Files (18.7 GB)