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DATA FILES FOR SJOS-WGS-2ndBatch

DATA FILES FOR SJOS-WGS-2ndBatch

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DUO:0000042
version: 2019-01-07

general research use

This data use permission indicates that use is allowed for general research use for any research purpose.

DAC to obtain datasets submitted by St. Jude Children's Research Hospital - Washington University Pediatric Cancer Genome Project

Learn more about the PCGP, disease types, publications, the PCGP Data Access Committee, and instructions to access data via EGA: https://pecan.stjude.cloud/permalink/pcgp Complete the attached Data Access Agreement (DAA), adhering to the following guidance, and return it to pcgpdaccoordinator@stjude.org: - Requests must be made for individual datasets (EGAD ID), not full studies (EGAS ID). - A separate DAA must be submitted for each dataset AND all original pages must be included. - The first listed applicant should be the Principal Investigator, Head of Department, or Department Chair leading the project. This should not be a staff scientist or postdoctoral researcher. - The email address used to access the dataset(s) must be a work-related email, not a personal email. - The signature of the “Institutional or Administrative Authority” must be an individual with the authority to sign documents on behalf of the requesting institution. This individual is known as the Authorized Organizational Representative (AOR) and is typically someone in the requesting institution's legal department or grants office. Heads/Chairs of Departments cannot sign as the Institutional or Administrative Authority. - Not adhering to these policies will delay your application. Once we receive your completed application, the DAC review typically takes approximately 15-20 business days. - If we do not receive a completed DAA from you within 90 days, we will consider this application closed and reject your request in the EGA portal. You may resubmit later as needed.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001000263 Whole Genome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF00000657237 bam 37.2 GB Report
EGAF00000657238 bam 26.9 GB Report
EGAF00000657239 bam 37.6 GB Report
EGAF00000657240 bam 38.6 GB Report
EGAF00000657241 bam 38.6 GB Report
EGAF00000657242 bam 36.6 GB Report
EGAF00000657243 bam 36.2 GB Report
EGAF00000657244 bam 29.8 GB Report
EGAF00000657245 bam 35.1 GB Report
EGAF00000657246 bam 36.7 GB Report
EGAF00000657247 bam 28.7 GB Report
EGAF00000657248 bam 34.8 GB Report
EGAF00000657249 bam 37.0 GB Report
EGAF00000657250 bam 36.8 GB Report
EGAF00000657251 bam 37.9 GB Report
EGAF00000657252 bam 39.1 GB Report
EGAF00000657253 bam 24.4 GB Report
EGAF00000657254 bam 33.8 GB Report
EGAF00000657255 bam 33.3 GB Report
EGAF00000657256 bam 33.1 GB Report
EGAF00000657257 bam 33.0 GB Report
EGAF00000657258 bam 34.0 GB Report
EGAF00000657259 bam 35.2 GB Report
EGAF00000657260 bam 36.7 GB Report
EGAF00000657261 bam 34.4 GB Report
EGAF00000657262 bam 34.9 GB Report
EGAF00000657263 bam 32.9 GB Report
EGAF00000657264 bam 36.5 GB Report
EGAF00000657265 bam 39.2 GB Report
EGAF00000657266 bam 36.5 GB Report
EGAF00000657267 bam 31.1 GB Report
EGAF00000657268 bam 31.5 GB Report
EGAF00000657269 bam 37.9 GB Report
EGAF00000657270 bam 9.6 GB Report
EGAF00000657271 bam 9.7 GB Report
EGAF00000657272 bam 40.5 GB Report
EGAF00000657273 bam 41.0 GB Report
EGAF00000657274 bam 35.2 GB Report
EGAF00000657275 bam 35.9 GB Report
EGAF00000657276 bam 29.3 GB Report
EGAF00000657277 bam 31.2 GB Report
EGAF00000657278 bam 34.4 GB Report
EGAF00000657279 bam 27.7 GB Report
EGAF00000657280 bam 28.8 GB Report
EGAF00000657281 bam 29.1 GB Report
EGAF00000657282 bam 29.9 GB Report
EGAF00000657283 bam 34.0 GB Report
EGAF00000657284 bam 32.8 GB Report
EGAF00000657285 bam 32.2 GB Report
EGAF00000657286 bam 31.9 GB Report
EGAF00000657287 bam 36.6 GB Report
EGAF00000657288 bam 32.0 GB Report
EGAF00000657289 bam 29.3 GB Report
EGAF00000657290 bam 28.1 GB Report
EGAF00000657291 bam 34.8 GB Report
EGAF00000657292 bam 31.6 GB Report
EGAF00000657293 bam 31.0 GB Report
EGAF00000657294 bam 35.0 GB Report
EGAF00000657295 bam 35.7 GB Report
EGAF00000657296 bam 33.7 GB Report
EGAF00000657297 bam 32.2 GB Report
EGAF00000657298 bam 29.6 GB Report
EGAF00000657299 bam 36.1 GB Report
EGAF00000657300 bam 34.0 GB Report
EGAF00000657301 bam 38.9 GB Report
EGAF00000657302 bam 37.8 GB Report
EGAF00000657303 bam 33.6 GB Report
EGAF00000657304 bam 37.6 GB Report
EGAF00000657305 bam 34.6 GB Report
EGAF00000657306 bam 39.1 GB Report
EGAF00000657307 bam 36.8 GB Report
EGAF00000657308 bam 33.3 GB Report
EGAF00000657309 bam 35.0 GB Report
EGAF00000657310 bam 31.2 GB Report
EGAF00000657311 bam 35.2 GB Report
EGAF00000657312 bam 36.3 GB Report
EGAF00000657313 bam 33.5 GB Report
EGAF00000657314 bam 34.0 GB Report
EGAF00000657315 bam 38.0 GB Report
EGAF00000657316 bam 30.6 GB Report
EGAF00000657317 bam 30.6 GB Report
EGAF00000657318 bam 32.0 GB Report
EGAF00000657319 bam 31.8 GB Report
EGAF00000657320 bam 35.5 GB Report
EGAF00000657321 bam 30.5 GB Report
EGAF00000657322 bam 29.1 GB Report
EGAF00000657323 bam 33.3 GB Report
EGAF00000657324 bam 31.9 GB Report
EGAF00000657325 bam 31.8 GB Report
EGAF00000657326 bam 29.0 GB Report
EGAF00000657327 bam 29.0 GB Report
EGAF00000657328 bam 32.4 GB Report
EGAF00000657329 bam 32.3 GB Report
EGAF00000657330 bam 33.0 GB Report
EGAF00000657331 bam 34.0 GB Report
EGAF00000657332 bam 28.4 GB Report
EGAF00000657333 bam 28.7 GB Report
EGAF00000657334 bam 37.3 GB Report
EGAF00000657335 bam 37.2 GB Report
EGAF00000657336 bam 35.9 GB Report
EGAF00000657337 bam 27.7 GB Report
EGAF00000657338 bam 28.9 GB Report
EGAF00000657339 bam 33.0 GB Report
EGAF00000657340 bam 32.1 GB Report
EGAF00000657341 bam 32.0 GB Report
EGAF00000657342 bam 38.0 GB Report
EGAF00000657343 bam 31.1 GB Report
EGAF00000657344 bam 31.0 GB Report
EGAF00000657345 bam 35.5 GB Report
EGAF00000657346 bam 29.7 GB Report
EGAF00000657347 bam 29.6 GB Report
111 Files (3.7 TB)