About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Fastq files used for searching for variants associated with endometriosis at 9p21 region

We performed target re-sequencing for 1.29 Mb interval of chromosome 9 (chr9:21299764–22590271, hg19). NimbleGen SeqCap EZ choice system was used as a target enrichment method (Roche Diagnostics). A DNA probe set complementary to the target region was designed by NimbleDesign. The libraries were sequenced on the Illumina MiSeq platform with 2×150-bp paired-end module (Illumina). Fastq files for 48 Japanese patients with endometriosis are deposited.

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Policy of National Institute of Genetics

Access to data will be possible when the data is used in an ethical and responsible manner for studying genetic basis of human complex traits and population structure.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001001741 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00001109150 fastq.gz 160.0 MB Report
EGAF00001109151 fastq.gz 176.3 MB Report
EGAF00001109152 fastq.gz 132.5 MB Report
EGAF00001109153 fastq.gz 146.6 MB Report
EGAF00001109154 fastq.gz 138.4 MB Report
EGAF00001109155 fastq.gz 152.4 MB Report
EGAF00001109156 fastq.gz 83.4 MB Report
EGAF00001109157 fastq.gz 88.7 MB Report
EGAF00001109158 fastq.gz 80.7 MB Report
EGAF00001109159 fastq.gz 86.2 MB Report
EGAF00001109160 fastq.gz 100.5 MB Report
EGAF00001109161 fastq.gz 107.5 MB Report
EGAF00001109162 fastq.gz 68.8 MB Report
EGAF00001109163 fastq.gz 74.1 MB Report
EGAF00001109184 fastq.gz 91.5 MB Report
EGAF00001109185 fastq.gz 100.3 MB Report
EGAF00001109186 fastq.gz 221.6 MB Report
EGAF00001109187 fastq.gz 244.6 MB Report
EGAF00001109188 fastq.gz 185.3 MB Report
EGAF00001109189 fastq.gz 203.2 MB Report
EGAF00001109190 fastq.gz 162.2 MB Report
EGAF00001109191 fastq.gz 178.9 MB Report
EGAF00001109192 fastq.gz 116.9 MB Report
EGAF00001109193 fastq.gz 129.9 MB Report
EGAF00001109194 fastq.gz 603.2 MB Report
EGAF00001109195 fastq.gz 664.7 MB Report
EGAF00001109196 fastq.gz 128.3 MB Report
EGAF00001109197 fastq.gz 142.3 MB Report
EGAF00001109198 fastq.gz 134.3 MB Report
EGAF00001109199 fastq.gz 148.9 MB Report
EGAF00001109200 fastq.gz 178.8 MB Report
EGAF00001109201 fastq.gz 198.5 MB Report
EGAF00001109202 fastq.gz 89.0 MB Report
EGAF00001109203 fastq.gz 95.7 MB Report
EGAF00001109284 fastq.gz 127.5 MB Report
EGAF00001109285 fastq.gz 139.7 MB Report
EGAF00001109286 fastq.gz 203.2 MB Report
EGAF00001109287 fastq.gz 225.2 MB Report
EGAF00001109288 fastq.gz 220.7 MB Report
EGAF00001109289 fastq.gz 242.5 MB Report
EGAF00001109290 fastq.gz 218.1 MB Report
EGAF00001109291 fastq.gz 240.4 MB Report
EGAF00001109292 fastq.gz 100.6 MB Report
EGAF00001109293 fastq.gz 111.0 MB Report
EGAF00001109294 fastq.gz 121.6 MB Report
EGAF00001109295 fastq.gz 134.0 MB Report
EGAF00001109296 fastq.gz 189.0 MB Report
EGAF00001109297 fastq.gz 209.8 MB Report
EGAF00001109298 fastq.gz 210.0 MB Report
EGAF00001109299 fastq.gz 231.9 MB Report
EGAF00001109300 fastq.gz 177.6 MB Report
EGAF00001109301 fastq.gz 197.1 MB Report
EGAF00001109302 fastq.gz 97.9 MB Report
EGAF00001109303 fastq.gz 104.6 MB Report
EGAF00001109304 fastq.gz 89.2 MB Report
EGAF00001109305 fastq.gz 95.5 MB Report
EGAF00001109306 fastq.gz 77.7 MB Report
EGAF00001109307 fastq.gz 82.7 MB Report
EGAF00001109438 fastq.gz 110.7 MB Report
EGAF00001109439 fastq.gz 122.0 MB Report
EGAF00001109440 fastq.gz 89.7 MB Report
EGAF00001109441 fastq.gz 100.0 MB Report
EGAF00001109442 fastq.gz 168.9 MB Report
EGAF00001109443 fastq.gz 185.8 MB Report
EGAF00001109444 fastq.gz 1.1 GB Report
EGAF00001109445 fastq.gz 1.2 GB Report
EGAF00001109446 fastq.gz 264.6 MB Report
EGAF00001109447 fastq.gz 292.8 MB Report
EGAF00001109448 fastq.gz 240.0 MB Report
EGAF00001109449 fastq.gz 264.6 MB Report
EGAF00001109450 fastq.gz 270.6 MB Report
EGAF00001109451 fastq.gz 298.2 MB Report
EGAF00001109452 fastq.gz 108.3 MB Report
EGAF00001109453 fastq.gz 121.2 MB Report
EGAF00001109574 fastq.gz 231.9 MB Report
EGAF00001109575 fastq.gz 255.6 MB Report
EGAF00001109576 fastq.gz 112.5 MB Report
EGAF00001109577 fastq.gz 123.8 MB Report
EGAF00001109578 fastq.gz 194.8 MB Report
EGAF00001109579 fastq.gz 216.5 MB Report
EGAF00001109580 fastq.gz 113.8 MB Report
EGAF00001109581 fastq.gz 125.6 MB Report
EGAF00001109582 fastq.gz 161.4 MB Report
EGAF00001109583 fastq.gz 181.9 MB Report
EGAF00001109584 fastq.gz 206.4 MB Report
EGAF00001109585 fastq.gz 229.5 MB Report
EGAF00001109586 fastq.gz 153.8 MB Report
EGAF00001109587 fastq.gz 169.1 MB Report
EGAF00001109588 fastq.gz 93.7 MB Report
EGAF00001109589 fastq.gz 100.6 MB Report
EGAF00001109590 fastq.gz 88.3 MB Report
EGAF00001109591 fastq.gz 94.2 MB Report
EGAF00001109592 fastq.gz 88.7 MB Report
EGAF00001109593 fastq.gz 94.5 MB Report
EGAF00001109594 fastq.gz 89.3 MB Report
EGAF00001109595 fastq.gz 95.3 MB Report
96 Files (17.7 GB)