Dataset

Fastq files used for searching for variants associated with endometriosis at 9p21 region

Dataset ID Technology Samples
EGAD00001001942 Illumina MiSeq 48

Dataset Description

We performed target re-sequencing for 1.29 Mb interval of chromosome 9 (chr9:21299764–22590271, hg19). NimbleGen SeqCap EZ choice system was used as a target enrichment method (Roche Diagnostics). A DNA probe set complementary to the target region was designed by NimbleDesign. The libraries were sequenced on the Illumina MiSeq platform with 2×150-bp paired-end module (Illumina). Fastq files for 48 Japanese patients with endometriosis are deposited.

Who controls access to this dataset

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact:

Data Access Committee of National Institute of Genetics of Japan
Contact person: Hirofumi Nakaoka
Email: hnakaoka [at] nig [dot] ac [dot] jp
More details: EGAC00001000448

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