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PCGP ERG (WXS)

DATA FILES FOR PCGP SJERG (WXS)

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DUO:0000042
version: 2019-01-07

general research use

This data use permission indicates that use is allowed for general research use for any research purpose.

DAC to obtain datasets submitted by St. Jude Children's Research Hospital - Washington University Pediatric Cancer Genome Project

Learn more about the PCGP, disease types, publications, the PCGP Data Access Committee, and instructions to access data via EGA: https://pecan.stjude.cloud/permalink/pcgp Complete the attached Data Access Agreement (DAA), adhering to the following guidance, and return it to pcgpdaccoordinator@stjude.org: - Requests must be made for individual datasets (EGAD ID), not full studies (EGAS ID). - A separate DAA must be submitted for each dataset AND all original pages must be included. - The first listed applicant should be the Principal Investigator, Head of Department, or Department Chair leading the project. This should not be a staff scientist or postdoctoral researcher. - The email address used to access the dataset(s) must be a work-related email, not a personal email. - The signature of the “Institutional or Administrative Authority” must be an individual with the authority to sign documents on behalf of the requesting institution. This individual is known as the Authorized Organizational Representative (AOR) and is typically someone in the requesting institution's legal department or grants office. Heads/Chairs of Departments cannot sign as the Institutional or Administrative Authority. - Not adhering to these policies will delay your application. Once we receive your completed application, the DAC review typically takes approximately 15-20 business days. - If we do not receive a completed DAA from you within 90 days, we will consider this application closed and reject your request in the EGA portal. You may resubmit later as needed.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001000514 Whole Genome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF00000879648 bam 5.8 GB Report
EGAF00000879649 bam 5.6 GB Report
EGAF00000879650 bam 3.8 GB Report
EGAF00000879651 bam 3.7 GB Report
EGAF00000879652 bam 4.9 GB Report
EGAF00000879653 bam 5.0 GB Report
EGAF00000879654 bam 4.7 GB Report
EGAF00000879655 bam 4.7 GB Report
EGAF00000879656 bam 5.9 GB Report
EGAF00000879657 bam 5.9 GB Report
EGAF00000879658 bam 5.1 GB Report
EGAF00000879659 bam 5.2 GB Report
EGAF00000879660 bam 5.6 GB Report
EGAF00000879661 bam 5.6 GB Report
EGAF00000879662 bam 6.5 GB Report
EGAF00000879663 bam 6.5 GB Report
EGAF00000879664 bam 6.5 GB Report
EGAF00000879665 bam 6.5 GB Report
EGAF00000879666 bam 5.1 GB Report
EGAF00000879667 bam 5.1 GB Report
EGAF00000879668 bam 5.1 GB Report
EGAF00000879669 bam 5.1 GB Report
EGAF00000879670 bam 4.0 GB Report
EGAF00000879671 bam 4.0 GB Report
EGAF00000879672 bam 4.2 GB Report
EGAF00000879673 bam 4.2 GB Report
EGAF00000879674 bam 5.2 GB Report
EGAF00000879675 bam 6.0 GB Report
EGAF00000879676 bam 5.9 GB Report
EGAF00000879677 bam 5.9 GB Report
EGAF00000879678 bam 5.6 GB Report
EGAF00000879679 bam 5.7 GB Report
EGAF00000879680 bam 5.6 GB Report
EGAF00000879681 bam 5.7 GB Report
EGAF00000879682 bam 4.3 GB Report
EGAF00000879683 bam 4.3 GB Report
EGAF00000879684 bam 5.0 GB Report
EGAF00000879685 bam 4.9 GB Report
EGAF00000879686 bam 3.9 GB Report
EGAF00000879687 bam 4.0 GB Report
EGAF00000879688 bam 4.5 GB Report
EGAF00000879689 bam 4.5 GB Report
EGAF00000879690 bam 4.8 GB Report
EGAF00000879691 bam 4.9 GB Report
EGAF00000879692 bam 4.9 GB Report
EGAF00000879693 bam 4.3 GB Report
EGAF00000879694 bam 7.2 GB Report
EGAF00000879695 bam 6.4 GB Report
EGAF00000879696 bam 4.6 GB Report
EGAF00000879697 bam 4.8 GB Report
EGAF00000879698 bam 5.5 GB Report
EGAF00000879699 bam 5.0 GB Report
EGAF00000879700 bam 7.3 GB Report
EGAF00000879701 bam 7.3 GB Report
EGAF00000879702 bam 7.7 GB Report
EGAF00000879703 bam 7.7 GB Report
EGAF00000879704 bam 5.0 GB Report
EGAF00000879705 bam 5.0 GB Report
EGAF00000879706 bam 4.2 GB Report
EGAF00000879707 bam 4.2 GB Report
EGAF00000879708 bam 5.6 GB Report
EGAF00000879709 bam 5.5 GB Report
EGAF00000879710 bam 4.4 GB Report
EGAF00000879711 bam 4.5 GB Report
EGAF00000879712 bam 5.3 GB Report
EGAF00000879713 bam 5.1 GB Report
EGAF00000879714 bam 7.0 GB Report
EGAF00000879715 bam 6.8 GB Report
EGAF00000879716 bam 7.3 GB Report
EGAF00000879717 bam 7.1 GB Report
EGAF00000879718 bam 3.9 GB Report
EGAF00000879719 bam 3.7 GB Report
EGAF00000879720 bam 6.2 GB Report
EGAF00000879721 bam 6.2 GB Report
EGAF00000879722 bam 4.6 GB Report
EGAF00000879723 bam 4.6 GB Report
EGAF00000879724 bam 5.9 GB Report
EGAF00000879725 bam 5.9 GB Report
EGAF00000879726 bam 5.5 GB Report
EGAF00000879727 bam 5.5 GB Report
EGAF00000879728 bam 4.0 GB Report
EGAF00000879729 bam 4.1 GB Report
EGAF00000879730 bam 7.2 GB Report
EGAF00000879731 bam 7.3 GB Report
84 Files (449.0 GB)