EPITREAT pilot cohort

Benchmark data set containing five tumor/normal pairs of non-small cell lung cancer (NSCLC) patients. Tissue pairs were screened with bisulfite (BS) sequencing, MeDIP methylation enrichment sequencing and RNA sequencing in order to identify differentially methylated and expressed spots in the genomes.

04/01/2017
10 samples
DAC: EGAC00001000485
Technology: Illumina HiSeq 2500

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Epitreat Data Production Consortium

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID	Study Title	Study Type
EGAS00001001822	QSEA – modelling of genome-wide DNA methylation from sequencing enrichment experiments	Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID	File Type	Size
EGAF00001210983	fastq.gz	1.2 GB
EGAF00001210984	fastq.gz	1.3 GB
EGAF00001225703	fastq.gz	2.1 GB
EGAF00001225704	fastq.gz	2.1 GB
EGAF00001225705	fastq.gz	1.8 GB
EGAF00001225706	fastq.gz	1.8 GB
EGAF00001225707	fastq.gz	2.1 GB
EGAF00001225708	fastq.gz	2.1 GB
EGAF00001225709	fastq.gz	1.8 GB
EGAF00001225710	fastq.gz	1.8 GB
EGAF00001225711	fastq.gz	1.5 GB
EGAF00001225712	fastq.gz	1.5 GB
EGAF00001225713	fastq.gz	2.0 GB
EGAF00001225714	fastq.gz	2.0 GB
EGAF00001225715	fastq.gz	2.1 GB
EGAF00001225716	fastq.gz	2.2 GB
EGAF00001225717	fastq.gz	2.4 GB
EGAF00001225718	fastq.gz	2.4 GB
EGAF00001225719	fastq.gz	1.8 GB
EGAF00001225720	fastq.gz	1.8 GB
EGAF00001225721	fastq.gz	2.3 GB
EGAF00001225722	fastq.gz	2.1 GB
EGAF00001225723	fastq.gz	2.1 GB
EGAF00001225724	fastq.gz	2.0 GB
EGAF00001225725	fastq.gz	885.1 MB
EGAF00001225726	fastq.gz	792.4 MB
EGAF00001225727	fastq.gz	2.4 GB
EGAF00001225728	fastq.gz	2.2 GB
EGAF00001225729	fastq.gz	1.4 GB
EGAF00001225730	fastq.gz	1.3 GB
EGAF00001225731	fastq.gz	2.2 GB
EGAF00001225732	fastq.gz	2.1 GB
EGAF00001225733	fastq.gz	2.3 GB
EGAF00001225734	fastq.gz	2.1 GB
EGAF00001225735	fastq.gz	1.2 GB
EGAF00001225736	fastq.gz	1.0 GB
EGAF00001225737	fastq.gz	2.2 GB
EGAF00001225738	fastq.gz	2.0 GB
EGAF00001225739	fastq.gz	1.0 GB
EGAF00001225740	fastq.gz	915.7 MB
EGAF00001225741	fastq.gz	1.7 GB
EGAF00001225742	fastq.gz	1.7 GB
EGAF00001225745	fastq.gz	3.1 GB
EGAF00001225746	fastq.gz	3.1 GB
EGAF00001225747	fastq.gz	3.4 GB
EGAF00001225748	fastq.gz	3.5 GB
EGAF00001225749	fastq.gz	1.8 GB
EGAF00001225750	fastq.gz	1.8 GB
EGAF00001225751	fastq.gz	3.3 GB
EGAF00001225752	fastq.gz	3.3 GB
EGAF00001225753	fastq.gz	2.6 GB
EGAF00001225754	fastq.gz	2.6 GB
EGAF00001225755	fastq.gz	1.2 GB
EGAF00001225756	fastq.gz	1.2 GB
EGAF00001225757	fastq.gz	2.9 GB
EGAF00001225758	fastq.gz	2.9 GB
EGAF00001225759	fastq.gz	745.2 MB
EGAF00001225760	fastq.gz	752.9 MB
EGAF00001225761	fastq.gz	716.9 MB
EGAF00001225762	fastq.gz	724.0 MB
EGAF00001225763	fastq.gz	680.0 MB
EGAF00001225764	fastq.gz	686.7 MB
EGAF00001225765	fastq.gz	692.1 MB
EGAF00001225766	fastq.gz	695.4 MB
EGAF00001225767	fastq.gz	641.4 MB
EGAF00001225768	fastq.gz	646.6 MB
EGAF00001225769	fastq.gz	664.0 MB
EGAF00001225770	fastq.gz	670.8 MB
EGAF00001225771	fastq.gz	690.6 MB
EGAF00001225772	fastq.gz	698.8 MB
EGAF00001225773	fastq.gz	662.4 MB
EGAF00001225774	fastq.gz	668.1 MB
EGAF00001225775	fastq.gz	677.4 MB
EGAF00001225776	fastq.gz	680.9 MB
EGAF00001225777	fastq.gz	578.7 MB
EGAF00001225778	fastq.gz	584.2 MB
76 Files (126.1 GB)