Dataset

RNA-Seq of patient-derived fibroblast cell lines with inborn errors of cobalamin (vitamin B12) metabolism and controls

Dataset ID Technology Samples
EGAD00001003142 Illumina HiSeq 1500,Illumina HiSeq 2000 38

Dataset Description

RNA sequencing of 31 patient-derived fibroblast cell lines from patients with inborn errors of cobalamin (vitamin B12) metabolism, and 7 control samples. The RNA seq library was prepared using the TruSeq Stranded Total RNA Sample Preparation Kit (Illumina RS-122–2301) including Ribo-Zero Gold depletion to remove ribosomal RNA. Sequencing was done via llumina Hi-Seq2000 sequencer, using 100bp paired end reads.

Who controls access to this dataset

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact:

McGill ECDAC
Contact person: Yann Joly
Email: dac [dot] edcc [at] mail [dot] mcgill [dot] ca
More details: EGAC00001000250

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