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Hip OA Functional Genomics RNAseq (2017-06-09)

From 9 patients undergoing hip joint replacement surgery for osteoarthritis, we collected 3 cartilage samples each: a low-grade sample (no obvious evidence of damage or fibrillation); a high-grade sample (damaged and fibrillated cartilage); an osteophytic sample (overlaid bony protrusions mainly around the margins of the articular surface). Multiplexed libraries were sequenced on Illumina HiSeq 2000 (75bp paired-end read length) and a cram file was produced for each sample. This dataset contains all the data available for this study on 2017-06-09.

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Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001002483 Transcriptome Analysis

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00001663877 cram 3.0 GB
EGAF00001663878 cram 2.9 GB
EGAF00001663879 cram 3.6 GB
EGAF00001663880 cram 2.8 GB
EGAF00001663881 cram 3.1 GB
EGAF00001663882 cram 3.0 GB
EGAF00001663883 cram 3.7 GB
EGAF00001663884 cram 3.4 GB
EGAF00001663885 cram 3.3 GB
EGAF00001663886 cram 3.9 GB
EGAF00001663887 cram 3.2 GB
EGAF00001663888 cram 3.1 GB
EGAF00001663889 cram 3.4 GB
EGAF00001663890 cram 2.8 GB
EGAF00001663891 cram 3.0 GB
EGAF00001663892 cram 2.5 GB
EGAF00001663893 cram 2.6 GB
EGAF00001663894 cram 2.7 GB
EGAF00001663895 cram 2.8 GB
EGAF00001663896 cram 2.6 GB
EGAF00001663897 cram 2.6 GB
EGAF00001663898 cram 2.6 GB
EGAF00001663899 cram 2.6 GB
EGAF00001663900 cram 2.8 GB
EGAF00001663901 cram 2.6 GB
EGAF00001663902 cram 2.6 GB
EGAF00001663903 cram 2.7 GB
27 Files (79.9 GB)