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Whole exome genome sequencing data to study "A biobank of patient-derived pediatric brain tumor models"

Whole exome sequencing data to 30 PDOX models (28 early passages, 3 late passages (1 overlap)), 3 cell lines, and 20 matching human tumors

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Data Access Committee for DKFZ DACO B06x - EGAC00001000219

his document specifies the policy for granting access to the European Genome-phenome Archive (EGA) secure Web based tools for managing data access permissions to the data stored in the EGA database. Access is granted to those Data Access Committee members named in this document Paul Flicek, head of Genes, Genomes and Variation. Conditions of access: The account holder will abide by all current and future policies of the EBI for computer use as well as computer use policies of the European Molecular Biology Laboratory (EMBL), of which the EBI is a part. All EGA specific policies and standard operating procedures (SOPs) must also be followed. All applicable policies will be provided to the authorized users. Method of access: The EBI will create a personal account for the authorized person. The account username and password together with a RSA key provide access to the secure EGA infrastructure. A separate document with detailed guidelines on how to access and use these tools is provided to each account holder. The EGA helpdesk provides training when needed. Review: All individuals access to the EGA user authorization tools will be reviewed annually by Paul Flicek. Any staff changes affecting the authorized person must be provided immediately to Paul Flicek (flicek@ebi.ac.uk). Authorized Data Access Committee user: Dr. Ursula Weber German Cancer Research Center (DKFZ) Foundation under Public Law Im Neuenheimer Feld 580 69120 Heidelberg, Germany u.weber@Dkfz-Heidelberg.de Supervisor of Authorized user: Prof. Dr. Peter Lichter Division of Molecular Genetics German Cancer Research Center (DKFZ) Foundation under Public Law Im Neuenheimer Feld 580 69120 Heidelberg, Germany. Peter.Lichter@Dkfz-Heidelberg.de Prof. Dr. Stefan Pfister Division of Pediatric Neurooncology German Cancer Research Center (DKFZ) Foundation under Public Law Im Neuenheimer Feld 580 69120 Heidelberg, Germany. S.Pfister@dkfz-heidelberg.de

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001002536 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00001744958 fastq.gz 3.5 GB
EGAF00001744959 fastq.gz 3.5 GB
EGAF00001744960 fastq.gz 2.8 GB
EGAF00001744961 fastq.gz 3.0 GB
EGAF00001744962 fastq.gz 4.6 GB
EGAF00001744963 fastq.gz 4.8 GB
EGAF00001744964 fastq.gz 4.4 GB
EGAF00001744965 fastq.gz 4.5 GB
EGAF00001744966 fastq.gz 5.4 GB
EGAF00001744967 fastq.gz 5.5 GB
EGAF00001744968 fastq.gz 2.0 GB
EGAF00001744969 fastq.gz 2.0 GB
EGAF00001744970 fastq.gz 5.8 GB
EGAF00001744971 fastq.gz 5.8 GB
EGAF00001744972 fastq.gz 2.4 GB
EGAF00001744973 fastq.gz 2.5 GB
EGAF00001744974 fastq.gz 4.9 GB
EGAF00001744975 fastq.gz 5.0 GB
EGAF00001744976 fastq.gz 4.1 GB
EGAF00001744977 fastq.gz 4.2 GB
EGAF00001744978 fastq.gz 3.6 GB
EGAF00001744979 fastq.gz 3.7 GB
EGAF00001744980 fastq.gz 11.0 GB
EGAF00001744981 fastq.gz 11.3 GB
EGAF00001744982 fastq.gz 2.3 GB
EGAF00001744983 fastq.gz 2.3 GB
EGAF00001744984 fastq.gz 4.5 GB
EGAF00001744985 fastq.gz 4.7 GB
EGAF00001744986 fastq.gz 4.5 GB
EGAF00001744987 fastq.gz 4.6 GB
EGAF00001744988 fastq.gz 2.3 GB
EGAF00001744989 fastq.gz 2.4 GB
EGAF00001744990 fastq.gz 4.8 GB
EGAF00001744991 fastq.gz 4.7 GB
EGAF00001744992 fastq.gz 3.7 GB
EGAF00001744993 fastq.gz 3.8 GB
EGAF00001744994 fastq.gz 1.5 GB
EGAF00001744995 fastq.gz 1.6 GB
EGAF00001744996 fastq.gz 1.7 GB
EGAF00001744997 fastq.gz 1.7 GB
EGAF00001744998 fastq.gz 3.5 GB
EGAF00001744999 fastq.gz 3.6 GB
EGAF00001745000 fastq.gz 1.7 GB
EGAF00001745001 fastq.gz 1.7 GB
EGAF00001745002 fastq.gz 3.4 GB
EGAF00001745003 fastq.gz 3.5 GB
EGAF00001745004 fastq.gz 1.7 GB
EGAF00001745005 fastq.gz 1.8 GB
EGAF00001745006 fastq.gz 1.6 GB
EGAF00001745007 fastq.gz 1.7 GB
EGAF00001745008 fastq.gz 5.2 GB
EGAF00001745009 fastq.gz 5.5 GB
EGAF00001745010 fastq.gz 5.2 GB
EGAF00001745011 fastq.gz 5.5 GB
EGAF00001745012 fastq.gz 2.3 GB
EGAF00001745013 fastq.gz 2.4 GB
EGAF00001745014 fastq.gz 3.6 GB
EGAF00001745015 fastq.gz 3.7 GB
EGAF00001745016 fastq.gz 1.8 GB
EGAF00001745017 fastq.gz 1.9 GB
EGAF00001745018 fastq.gz 5.2 GB
EGAF00001745019 fastq.gz 5.3 GB
EGAF00001745020 fastq.gz 2.0 GB
EGAF00001745021 fastq.gz 2.0 GB
EGAF00001745022 fastq.gz 2.3 GB
EGAF00001745023 fastq.gz 2.3 GB
EGAF00001745024 fastq.gz 3.2 GB
EGAF00001745025 fastq.gz 3.3 GB
EGAF00001745026 fastq.gz 3.6 GB
EGAF00001745027 fastq.gz 3.7 GB
EGAF00001745028 fastq.gz 1.7 GB
EGAF00001745029 fastq.gz 1.7 GB
EGAF00001745030 fastq.gz 1.4 GB
EGAF00001745031 fastq.gz 1.5 GB
EGAF00001745032 fastq.gz 4.1 GB
EGAF00001745033 fastq.gz 4.3 GB
EGAF00001745034 fastq.gz 3.7 GB
EGAF00001745035 fastq.gz 3.9 GB
EGAF00001745036 fastq.gz 3.4 GB
EGAF00001745037 fastq.gz 3.6 GB
EGAF00001745038 fastq.gz 1.6 GB
EGAF00001745039 fastq.gz 1.6 GB
EGAF00001745040 fastq.gz 3.1 GB
EGAF00001745041 fastq.gz 3.2 GB
EGAF00001745042 fastq.gz 2.0 GB
EGAF00001745043 fastq.gz 2.0 GB
EGAF00001745044 fastq.gz 4.2 GB
EGAF00001745045 fastq.gz 4.2 GB
EGAF00001745046 fastq.gz 4.5 GB
EGAF00001745047 fastq.gz 4.6 GB
EGAF00001745048 fastq.gz 2.6 GB
EGAF00001745049 fastq.gz 2.7 GB
EGAF00001745050 fastq.gz 2.5 GB
EGAF00001745051 fastq.gz 2.6 GB
EGAF00001745052 fastq.gz 1.7 GB
EGAF00001745053 fastq.gz 1.7 GB
EGAF00001745054 fastq.gz 2.6 GB
EGAF00001745055 fastq.gz 2.7 GB
EGAF00001745056 fastq.gz 2.6 GB
EGAF00001745057 fastq.gz 2.6 GB
EGAF00001745058 fastq.gz 1.8 GB
EGAF00001745059 fastq.gz 1.9 GB
EGAF00001745060 fastq.gz 2.5 GB
EGAF00001745061 fastq.gz 2.5 GB
EGAF00001745062 fastq.gz 1.9 GB
EGAF00001745063 fastq.gz 2.0 GB
EGAF00001745064 fastq.gz 2.0 GB
EGAF00001745065 fastq.gz 2.0 GB
EGAF00001745066 fastq.gz 2.4 GB
EGAF00001745067 fastq.gz 2.5 GB
EGAF00001745068 fastq.gz 3.0 GB
EGAF00001745069 fastq.gz 3.2 GB
EGAF00001745070 fastq.gz 10.9 GB
EGAF00001745071 fastq.gz 11.2 GB
EGAF00001745072 fastq.gz 2.3 GB
EGAF00001745073 fastq.gz 2.3 GB
EGAF00001745074 fastq.gz 4.7 GB
EGAF00001745075 fastq.gz 5.0 GB
EGAF00001745076 fastq.gz 1.6 GB
EGAF00001745077 fastq.gz 1.7 GB
EGAF00001745078 fastq.gz 5.0 GB
EGAF00001745079 fastq.gz 5.2 GB
EGAF00001745080 fastq.gz 1.7 GB
EGAF00001745081 fastq.gz 1.7 GB
EGAF00001745082 fastq.gz 4.5 GB
EGAF00001745083 fastq.gz 4.7 GB
EGAF00001745084 fastq.gz 2.2 GB
EGAF00001745085 fastq.gz 2.4 GB
EGAF00001745086 fastq.gz 1.8 GB
EGAF00001745087 fastq.gz 1.9 GB
EGAF00001745088 fastq.gz 1.7 GB
EGAF00001745089 fastq.gz 1.7 GB
EGAF00001745090 fastq.gz 2.3 GB
EGAF00001745091 fastq.gz 2.3 GB
EGAF00001745092 fastq.gz 2.4 GB
EGAF00001745093 fastq.gz 2.5 GB
EGAF00001745094 fastq.gz 2.3 GB
EGAF00001745095 fastq.gz 2.3 GB
EGAF00001745096 fastq.gz 4.5 GB
EGAF00001745097 fastq.gz 4.8 GB
EGAF00001745098 fastq.gz 1.4 GB
EGAF00001745099 fastq.gz 1.5 GB
EGAF00001745100 fastq.gz 1.5 GB
EGAF00001745101 fastq.gz 1.6 GB
EGAF00001745102 fastq.gz 2.6 GB
EGAF00001745103 fastq.gz 2.7 GB
EGAF00001745104 fastq.gz 1.6 GB
EGAF00001745105 fastq.gz 1.7 GB
EGAF00001745106 fastq.gz 2.6 GB
EGAF00001745107 fastq.gz 2.7 GB
EGAF00001745108 fastq.gz 2.5 GB
EGAF00001745109 fastq.gz 2.6 GB
EGAF00001745110 fastq.gz 1.5 GB
EGAF00001745111 fastq.gz 1.5 GB
EGAF00001745112 fastq.gz 3.9 GB
EGAF00001745113 fastq.gz 4.0 GB
EGAF00001745114 fastq.gz 4.3 GB
EGAF00001745115 fastq.gz 4.6 GB
EGAF00001745116 fastq.gz 3.6 GB
EGAF00001745117 fastq.gz 3.8 GB
EGAF00001745118 fastq.gz 2.7 GB
EGAF00001745119 fastq.gz 2.7 GB
EGAF00001745120 fastq.gz 3.5 GB
EGAF00001745121 fastq.gz 3.6 GB
164 Files (530.2 GB)