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ICGC PCAWG Dataset: LIRI-JP_PCAWG_RNA-Seq_TopHat2

ICGC PCAWG Dataset for RNA-Seq BAM aligned using TopHat2. Project: LIRI-JP.

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ICGC Data Access

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001001692 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00001719366 bam 12.1 GB
EGAF00001719367 bai 5.5 MB
EGAF00001719368 xml.gz 3.5 kB
EGAF00001719369 bam 5.4 GB
EGAF00001719370 bai 4.8 MB
EGAF00001719371 xml.gz 3.5 kB
EGAF00001719372 bam 4.7 GB
EGAF00001719373 bai 4.4 MB
EGAF00001719374 xml.gz 3.5 kB
EGAF00001719375 bam 2.8 GB
EGAF00001719376 bai 4.0 MB
EGAF00001719377 xml.gz 3.5 kB
EGAF00001719378 bam 5.8 GB
EGAF00001719379 bai 4.6 MB
EGAF00001719380 xml.gz 3.5 kB
EGAF00001719381 bam 5.0 GB
EGAF00001719382 bai 4.4 MB
EGAF00001719383 xml.gz 3.5 kB
EGAF00001719384 bam 6.3 GB
EGAF00001719385 bai 4.5 MB
EGAF00001719386 xml.gz 3.5 kB
EGAF00001719387 bam 5.2 GB
EGAF00001719388 bai 4.9 MB
EGAF00001719389 xml.gz 3.5 kB
EGAF00001719390 bam 4.1 GB
EGAF00001719391 bai 3.8 MB
EGAF00001719392 xml.gz 3.5 kB
EGAF00001719393 bam 9.5 GB
EGAF00001719394 bai 5.2 MB
EGAF00001719395 xml.gz 3.5 kB
EGAF00001719396 bam 6.4 GB
EGAF00001719397 bai 4.9 MB
EGAF00001719398 xml.gz 3.5 kB
EGAF00001719399 bam 5.3 GB
EGAF00001719400 bai 4.5 MB
EGAF00001719401 xml.gz 3.5 kB
EGAF00001719402 bam 6.4 GB
EGAF00001719403 bai 5.2 MB
EGAF00001719404 xml.gz 3.5 kB
EGAF00001719405 bam 11.5 GB
EGAF00001719406 bai 5.2 MB
EGAF00001719407 xml.gz 3.5 kB
EGAF00001719408 bam 8.1 GB
EGAF00001719409 bai 5.0 MB
EGAF00001719410 xml.gz 3.5 kB
EGAF00001719411 bam 8.3 GB
EGAF00001719412 bai 5.3 MB
EGAF00001719413 xml.gz 3.5 kB
EGAF00001719414 bam 6.8 GB
EGAF00001719415 bai 5.1 MB
EGAF00001719416 xml.gz 3.5 kB
EGAF00001719417 bam 5.5 GB
EGAF00001719418 bai 5.0 MB
EGAF00001719419 xml.gz 3.5 kB
EGAF00001719420 bam 11.6 GB
EGAF00001719421 bai 5.9 MB
EGAF00001719422 xml.gz 3.5 kB
EGAF00001719423 bam 3.6 GB
EGAF00001719424 bai 4.8 MB
EGAF00001719425 xml.gz 3.5 kB
EGAF00001719426 bam 4.1 GB
EGAF00001719427 bai 5.0 MB
EGAF00001719428 xml.gz 3.5 kB
EGAF00001719429 bam 8.7 GB
EGAF00001719430 bai 5.1 MB
EGAF00001719431 xml.gz 3.5 kB
EGAF00001719432 bam 6.1 GB
EGAF00001719433 bai 4.4 MB
EGAF00001719434 xml.gz 3.5 kB
EGAF00001719435 bam 5.3 GB
EGAF00001719436 bai 4.8 MB
EGAF00001719437 xml.gz 3.5 kB
EGAF00001719438 bam 4.6 GB
EGAF00001719439 bai 4.8 MB
EGAF00001719440 xml.gz 3.5 kB
EGAF00001719441 bam 6.8 GB
EGAF00001719442 bai 4.7 MB
EGAF00001719443 xml.gz 3.5 kB
EGAF00001719444 bam 8.2 GB
EGAF00001719445 bai 5.3 MB
EGAF00001719446 xml.gz 3.5 kB
EGAF00001719447 bam 8.3 GB
EGAF00001719448 bai 5.1 MB
EGAF00001719449 xml.gz 3.5 kB
EGAF00001719450 bam 5.2 GB
EGAF00001719451 bai 4.2 MB
EGAF00001719452 xml.gz 3.5 kB
EGAF00001719453 bam 4.4 GB
EGAF00001719454 bai 4.2 MB
EGAF00001719455 xml.gz 3.5 kB
EGAF00001719456 bam 10.2 GB
EGAF00001719457 bai 5.3 MB
EGAF00001719458 xml.gz 3.5 kB
EGAF00001719459 bam 5.2 GB
EGAF00001719460 bai 4.7 MB
EGAF00001719461 xml.gz 3.5 kB
EGAF00001719462 bam 7.0 GB
EGAF00001719463 bai 4.7 MB
EGAF00001719464 xml.gz 3.5 kB
EGAF00001719465 bam 3.1 GB
EGAF00001719466 bai 5.7 MB
EGAF00001719467 xml.gz 3.5 kB
EGAF00001719468 bam 6.9 GB
EGAF00001719469 bai 4.8 MB
EGAF00001719470 xml.gz 3.5 kB
EGAF00001719471 bam 6.5 GB
EGAF00001719472 bai 4.9 MB
EGAF00001719473 xml.gz 3.5 kB
EGAF00001719474 bam 8.5 GB
EGAF00001719475 bai 5.3 MB
EGAF00001719476 xml.gz 3.5 kB
EGAF00001719477 bam 11.2 GB
EGAF00001719478 bai 5.2 MB
EGAF00001719479 xml.gz 3.5 kB
EGAF00001719480 bam 6.8 GB
EGAF00001719481 bai 4.8 MB
EGAF00001719482 xml.gz 3.5 kB
EGAF00001719483 bam 7.4 GB
EGAF00001719484 bai 5.2 MB
EGAF00001719485 xml.gz 3.5 kB
EGAF00001719486 bam 3.0 GB
EGAF00001719487 bai 3.8 MB
EGAF00001719488 xml.gz 3.5 kB
EGAF00001719489 bam 6.4 GB
EGAF00001719490 bai 5.5 MB
EGAF00001719491 xml.gz 3.5 kB
EGAF00001719492 bam 9.3 GB
EGAF00001719493 bai 5.2 MB
EGAF00001719494 xml.gz 3.5 kB
EGAF00001719495 bam 6.7 GB
EGAF00001719496 bai 5.1 MB
EGAF00001719497 xml.gz 3.5 kB
EGAF00001719498 bam 9.7 GB
EGAF00001719499 bai 5.3 MB
EGAF00001719500 xml.gz 3.5 kB
EGAF00001719501 bam 5.7 GB
EGAF00001719502 bai 4.8 MB
EGAF00001719503 xml.gz 3.5 kB
EGAF00001719504 bam 6.6 GB
EGAF00001719505 bai 5.5 MB
EGAF00001719506 xml.gz 3.5 kB
EGAF00001719507 bam 4.2 GB
EGAF00001719508 bai 4.2 MB
EGAF00001719509 xml.gz 3.5 kB
EGAF00001719510 bam 12.8 GB
EGAF00001719511 bai 5.3 MB
EGAF00001719512 xml.gz 3.5 kB
EGAF00001719513 bam 9.8 GB
EGAF00001719514 bai 5.8 MB
EGAF00001719515 xml.gz 3.5 kB
EGAF00001719516 bam 7.6 GB
EGAF00001719517 bai 4.8 MB
EGAF00001719518 xml.gz 3.5 kB
EGAF00001719519 bam 10.2 GB
EGAF00001719520 bai 5.5 MB
EGAF00001719521 xml.gz 3.5 kB
EGAF00001719522 bam 12.9 GB
EGAF00001719523 bai 6.1 MB
EGAF00001719524 xml.gz 3.5 kB
EGAF00001719525 bam 13.3 GB
EGAF00001719526 bai 5.3 MB
EGAF00001719527 xml.gz 3.5 kB
EGAF00001719528 bam 12.2 GB
EGAF00001719529 bai 5.3 MB
EGAF00001719530 xml.gz 3.5 kB
EGAF00001719531 bam 8.5 GB
EGAF00001719532 bai 4.1 MB
EGAF00001719533 xml.gz 3.5 kB
EGAF00001719534 bam 4.0 GB
EGAF00001719535 bai 4.5 MB
EGAF00001719536 xml.gz 3.5 kB
EGAF00001719537 bam 7.1 GB
EGAF00001719538 bai 5.0 MB
EGAF00001719539 xml.gz 3.5 kB
EGAF00001719540 bam 12.3 GB
EGAF00001719541 bai 5.5 MB
EGAF00001719542 xml.gz 3.5 kB
EGAF00001719543 bam 8.7 GB
EGAF00001719544 bai 5.0 MB
EGAF00001719545 xml.gz 3.5 kB
EGAF00001719546 bam 6.1 GB
EGAF00001719547 bai 5.0 MB
EGAF00001719548 xml.gz 3.5 kB
EGAF00001719549 bam 13.3 GB
EGAF00001719550 bai 5.7 MB
EGAF00001719551 xml.gz 3.5 kB
EGAF00001719552 bam 6.9 GB
EGAF00001719553 bai 4.8 MB
EGAF00001719554 xml.gz 3.5 kB
EGAF00001719555 bam 9.7 GB
EGAF00001719556 bai 5.0 MB
EGAF00001719557 xml.gz 3.5 kB
EGAF00001719558 bam 7.5 GB
EGAF00001719559 bai 5.1 MB
EGAF00001719560 xml.gz 3.5 kB
EGAF00001719561 bam 7.2 GB
EGAF00001719562 bai 4.8 MB
EGAF00001719563 xml.gz 3.5 kB
EGAF00001719564 bam 2.9 GB
EGAF00001719565 bai 4.1 MB
EGAF00001719566 xml.gz 3.5 kB
EGAF00001719567 bam 7.0 GB
EGAF00001719568 bai 4.7 MB
EGAF00001719569 xml.gz 3.5 kB
EGAF00001719570 bam 15.9 GB
EGAF00001719571 bai 6.3 MB
EGAF00001719572 xml.gz 3.5 kB
EGAF00001719573 bam 12.9 GB
EGAF00001719574 bai 5.6 MB
EGAF00001719575 xml.gz 3.5 kB
EGAF00001719576 bam 9.3 GB
EGAF00001719577 bai 6.1 MB
EGAF00001719578 xml.gz 3.5 kB
EGAF00001719579 bam 4.7 GB
EGAF00001719580 bai 4.6 MB
EGAF00001719581 xml.gz 3.5 kB
EGAF00001719582 bam 7.4 GB
EGAF00001719583 bai 5.2 MB
EGAF00001719584 xml.gz 3.5 kB
EGAF00001719585 bam 10.2 GB
EGAF00001719586 bai 5.2 MB
EGAF00001719587 xml.gz 3.5 kB
EGAF00001719588 bam 7.2 GB
EGAF00001719589 bai 4.8 MB
EGAF00001719590 xml.gz 3.5 kB
EGAF00001719591 bam 12.8 GB
EGAF00001719592 bai 5.2 MB
EGAF00001719593 xml.gz 3.5 kB
EGAF00001719594 bam 3.8 GB
EGAF00001719595 bai 4.4 MB
EGAF00001719596 xml.gz 3.5 kB
EGAF00001719597 bam 7.1 GB
EGAF00001719598 bai 5.0 MB
EGAF00001719599 xml.gz 3.5 kB
EGAF00001719600 bam 5.3 GB
EGAF00001719601 bai 4.8 MB
EGAF00001719602 xml.gz 3.5 kB
EGAF00001719603 bam 7.0 GB
EGAF00001719604 bai 4.9 MB
EGAF00001719605 xml.gz 3.5 kB
EGAF00001719606 bam 9.0 GB
EGAF00001719607 bai 5.1 MB
EGAF00001719608 xml.gz 3.5 kB
EGAF00001719609 bam 7.9 GB
EGAF00001719610 bai 5.0 MB
EGAF00001719611 xml.gz 3.5 kB
EGAF00001719612 bam 3.9 GB
EGAF00001719613 bai 4.4 MB
EGAF00001719614 xml.gz 3.5 kB
EGAF00001719615 bam 5.6 GB
EGAF00001719616 bai 4.5 MB
EGAF00001719617 xml.gz 3.5 kB
EGAF00001719618 bam 4.1 GB
EGAF00001719619 bai 5.4 MB
EGAF00001719620 xml.gz 3.5 kB
EGAF00001719621 bam 8.5 GB
EGAF00001719622 bai 5.4 MB
EGAF00001719623 xml.gz 3.5 kB
EGAF00001719624 bam 5.1 GB
EGAF00001719625 bai 4.9 MB
EGAF00001719626 xml.gz 3.5 kB
EGAF00001719627 bam 8.8 GB
EGAF00001719628 bai 5.4 MB
EGAF00001719629 xml.gz 3.5 kB
EGAF00001719630 bam 9.1 GB
EGAF00001719631 bai 5.7 MB
EGAF00001719632 xml.gz 3.5 kB
EGAF00001719633 bam 5.6 GB
EGAF00001719634 bai 4.9 MB
EGAF00001719635 xml.gz 3.5 kB
EGAF00001719636 bam 14.8 GB
EGAF00001719637 bai 6.1 MB
EGAF00001719638 xml.gz 3.5 kB
EGAF00001719639 bam 4.9 GB
EGAF00001719640 bai 5.1 MB
EGAF00001719641 xml.gz 3.5 kB
EGAF00001719642 bam 6.8 GB
EGAF00001719643 bai 5.0 MB
EGAF00001719644 xml.gz 3.5 kB
EGAF00001719645 bam 5.6 GB
EGAF00001719646 bai 4.3 MB
EGAF00001719647 xml.gz 3.5 kB
EGAF00001719648 bam 5.7 GB
EGAF00001719649 bai 5.5 MB
EGAF00001719650 xml.gz 3.5 kB
EGAF00001719651 bam 11.1 GB
EGAF00001719652 bai 5.8 MB
EGAF00001719653 xml.gz 3.5 kB
EGAF00001719654 bam 5.4 GB
EGAF00001719655 bai 5.0 MB
EGAF00001719656 xml.gz 3.5 kB
EGAF00001719657 bam 7.7 GB
EGAF00001719658 bai 5.5 MB
EGAF00001719659 xml.gz 3.5 kB
EGAF00001719660 bam 4.6 GB
EGAF00001719661 bai 4.9 MB
EGAF00001719662 xml.gz 3.5 kB
EGAF00001719663 bam 13.3 GB
EGAF00001719664 bai 5.8 MB
EGAF00001719665 xml.gz 3.5 kB
EGAF00001719666 bam 9.7 GB
EGAF00001719667 bai 5.2 MB
EGAF00001719668 xml.gz 3.5 kB
EGAF00001719669 bam 8.6 GB
EGAF00001719670 bai 5.1 MB
EGAF00001719671 xml.gz 3.5 kB
EGAF00001719672 bam 9.6 GB
EGAF00001719673 bai 5.1 MB
EGAF00001719674 xml.gz 3.5 kB
EGAF00001719675 bam 9.3 GB
EGAF00001719676 bai 5.2 MB
EGAF00001719677 xml.gz 3.5 kB
EGAF00001719678 bam 5.0 GB
EGAF00001719679 bai 4.9 MB
EGAF00001719680 xml.gz 3.5 kB
EGAF00001719681 bam 8.3 GB
EGAF00001719682 bai 5.2 MB
EGAF00001719683 xml.gz 3.5 kB
EGAF00001719684 bam 6.1 GB
EGAF00001719685 bai 4.9 MB
EGAF00001719686 xml.gz 3.5 kB
EGAF00001719687 bam 10.8 GB
EGAF00001719688 bai 5.5 MB
EGAF00001719689 xml.gz 3.5 kB
EGAF00001719690 bam 8.0 GB
EGAF00001719691 bai 4.9 MB
EGAF00001719692 xml.gz 3.5 kB
EGAF00001719693 bam 5.1 GB
EGAF00001719694 bai 4.5 MB
EGAF00001719695 xml.gz 3.5 kB
EGAF00001719696 bam 6.5 GB
EGAF00001719697 bai 4.9 MB
EGAF00001719698 xml.gz 3.5 kB
EGAF00001719699 bam 5.1 GB
EGAF00001719700 bai 5.1 MB
EGAF00001719701 xml.gz 3.5 kB
EGAF00001719702 bam 7.6 GB
EGAF00001719703 bai 5.4 MB
EGAF00001719704 xml.gz 3.5 kB
EGAF00001719705 bam 6.6 GB
EGAF00001719706 bai 3.8 MB
EGAF00001719707 xml.gz 3.5 kB
EGAF00001719708 bam 9.4 GB
EGAF00001719709 bai 5.2 MB
EGAF00001719710 xml.gz 3.5 kB
EGAF00001719711 bam 6.3 GB
EGAF00001719712 bai 5.3 MB
EGAF00001719713 xml.gz 3.5 kB
EGAF00001719714 bam 5.9 GB
EGAF00001719715 bai 4.5 MB
EGAF00001719716 xml.gz 3.5 kB
EGAF00001719717 bam 6.7 GB
EGAF00001719718 bai 4.8 MB
EGAF00001719719 xml.gz 3.5 kB
EGAF00001719720 bam 3.8 GB
EGAF00001719721 bai 4.6 MB
EGAF00001719722 xml.gz 3.5 kB
EGAF00001719723 bam 13.7 GB
EGAF00001719724 bai 5.3 MB
EGAF00001719725 xml.gz 3.5 kB
EGAF00001719726 bam 10.3 GB
EGAF00001719727 bai 5.6 MB
EGAF00001719728 xml.gz 3.5 kB
EGAF00001719729 bam 4.4 GB
EGAF00001719730 bai 4.2 MB
EGAF00001719731 xml.gz 3.5 kB
EGAF00001719732 bam 8.9 GB
EGAF00001719733 bai 4.7 MB
EGAF00001719734 xml.gz 3.5 kB
EGAF00001719735 bam 9.9 GB
EGAF00001719736 bai 5.6 MB
EGAF00001719737 xml.gz 3.5 kB
EGAF00001719738 bam 7.9 GB
EGAF00001719739 bai 5.2 MB
EGAF00001719740 xml.gz 3.5 kB
EGAF00001719741 bam 8.7 GB
EGAF00001719742 bai 5.1 MB
EGAF00001719743 xml.gz 3.5 kB
EGAF00001719744 bam 5.1 GB
EGAF00001719745 bai 4.5 MB
EGAF00001719746 xml.gz 3.5 kB
EGAF00001719747 bam 5.5 GB
EGAF00001719748 bai 4.5 MB
EGAF00001719749 xml.gz 3.5 kB
EGAF00001719750 bam 5.7 GB
EGAF00001719751 bai 4.7 MB
EGAF00001719752 xml.gz 3.5 kB
EGAF00001719753 bam 4.3 GB
EGAF00001719754 bai 4.8 MB
EGAF00001719755 xml.gz 3.5 kB
390 Files (974.7 GB)