SCLC study MGH - WES dataset
For whole-exome sequencing 1 µg of DNA from fresh-frozen tumors was fragmented by sonication technology (for DNA from fresh-frozen tumors: Bioruptor, diagenode, Liѐge, Belgium; for DNA from FFPE material: Covaris). The fragments were end-repaired and adaptor-ligated, including incorporation of sample index barcodes. After size selection, libraries were subjected to an enrichment process with Sure select XT (Agilent). The final libraries were sequenced with a paired-end 2×75 bp protocol for an average coverage of 100-120x
- 04/03/2018
- 7 samples
- DAC: EGAC00001000064
- Technology: Illumina HiSeq 2000
Data Access Committee University of Cologne
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001002853 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
i
|
|---|---|---|---|---|
| EGAF00001877945 | bam | 6.2 GB | Report |
|
| EGAF00001877946 | bam | 7.6 GB | Report |
|
| EGAF00001877947 | bam | 10.0 GB | Report |
|
| EGAF00001877948 | bam | 7.4 GB | Report |
|
| EGAF00001877949 | bam | 5.6 GB | Report |
|
| EGAF00001877950 | bam | 7.9 GB | Report |
|
| EGAF00001877951 | bam | 7.6 GB | Report |
|
| EGAF00001877952 | bam | 7.3 GB | Report |
|
| EGAF00001877953 | bam | 4.9 GB | Report |
|
| EGAF00001877954 | bam | 9.5 GB | Report |
|
| EGAF00001877955 | bam | 7.7 GB | Report |
|
| EGAF00001877956 | bam | 7.7 GB | Report |
|
| EGAF00001877957 | bam | 4.9 GB | Report |
|
| EGAF00001877958 | bam | 7.8 GB | Report |
|
| EGAF00001877959 | bam | 7.9 GB | Report |
|
| EGAF00001877960 | bam | 7.8 GB | Report |
|
| EGAF00001877961 | bam | 5.3 GB | Report |
|
| EGAF00001877962 | bam | 17.8 GB | Report |
|
| EGAF00001877963 | bam | 6.9 GB | Report |
|
| EGAF00001877964 | bam | 7.5 GB | Report |
|
| EGAF00001877965 | bam | 16.9 GB | Report |
|
| EGAF00001877966 | bam | 8.1 GB | Report |
|
| EGAF00001877967 | bam | 7.8 GB | Report |
|
| EGAF00001877968 | bam | 7.0 GB | Report |
|
| EGAF00001877969 | bam | 5.7 GB | Report |
|
| EGAF00001877970 | bam | 7.8 GB | Report |
|
| EGAF00001877971 | bam | 6.9 GB | Report |
|
| 27 Files (215.4 GB) | ||||