Sequencing data for oesophageal and related samples - Abujudeh et al (WGS, fastSeq)
Data supporting: "Low-cost and clinically applicable copy number profiling using repeat DNA." Abujudeh et al. DNA WGS (BAM files) DNA fastSeq (fastq files) Tumours, Barrett's, normals.
- 10/08/2018
- 60 samples
- DAC: EGAC00001000010
- Technologies: Illumina HiSeq 2000, Illumina MiSeq
DUO:0000006 version: 2021-02-23
health or medical or biomedical research
This data use permission indicates that use is allowed for health/medical/biomedical purposes; does not include the study of population origins or ancestry.
DUO:0000018 version: 2021-02-23
not for profit, non commercial use only
This data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.
DUO:0000027 version: 2021-02-23
project specific restriction
This data use modifier indicates that use is limited to use within an approved project.
DUO:0000042 version: 2021-02-23
general research use
This data use permission indicates that use is allowed for general research use for any research purpose.
ICGC Data Access
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001000723 | Other | |
| EGAS00001000725 | Other | |
| EGAS00001000726 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
i
|
|---|---|---|---|---|
| EGAF00002057364 | bam | 170.9 GB | Report |
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| EGAF00002057365 | bam | 201.8 GB | Report |
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| EGAF00002057366 | bam | 188.6 GB | Report |
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| EGAF00002057367 | bam | 172.4 GB | Report |
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| EGAF00002057368 | bam | 164.6 GB | Report |
|
| EGAF00002057369 | bam | 269.2 GB | Report |
|
| EGAF00002057370 | bam | 199.0 GB | Report |
|
| EGAF00002057372 | bam | 147.0 GB | Report |
|
| EGAF00002057373 | bam | 170.8 GB | Report |
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| EGAF00002057376 | bam | 177.5 GB | Report |
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| EGAF00002057377 | bam | 174.0 GB | Report |
|
| EGAF00002057378 | bam | 109.0 GB | Report |
|
| EGAF00002057379 | bam | 93.7 GB | Report |
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| EGAF00002057380 | bam | 109.9 GB | Report |
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| EGAF00002057381 | bam | 116.8 GB | Report |
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| EGAF00002057382 | bam | 116.4 GB | Report |
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| EGAF00002057383 | bam | 121.3 GB | Report |
|
| EGAF00002057384 | bam | 96.4 GB | Report |
|
| EGAF00002057385 | bam | 113.1 GB | Report |
|
| EGAF00002057386 | bam | 121.0 GB | Report |
|
| EGAF00002057387 | bam | 121.3 GB | Report |
|
| EGAF00002057388 | bam | 89.2 GB | Report |
|
| EGAF00002057389 | bam | 102.1 GB | Report |
|
| EGAF00002057390 | bam | 103.5 GB | Report |
|
| EGAF00002057391 | bam | 112.6 GB | Report |
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| EGAF00002057392 | bam | 92.5 GB | Report |
|
| EGAF00002057788 | fq.gz | 51.7 MB | Report |
|
| EGAF00002057789 | fq.gz | 128.3 MB | Report |
|
| EGAF00002057790 | fq.gz | 159.6 MB | Report |
|
| EGAF00002057791 | fq.gz | 335.7 MB | Report |
|
| EGAF00002057792 | fq.gz | 129.1 MB | Report |
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| EGAF00002057793 | fq.gz | 119.3 MB | Report |
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| EGAF00002057794 | fq.gz | 250.9 MB | Report |
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| EGAF00002057795 | fq.gz | 160.5 MB | Report |
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| EGAF00002057796 | fq.gz | 379.0 MB | Report |
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| EGAF00002057797 | fq.gz | 187.4 MB | Report |
|
| EGAF00002057798 | fq.gz | 148.9 MB | Report |
|
| EGAF00002057799 | fq.gz | 204.1 MB | Report |
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| EGAF00002057800 | fq.gz | 16.9 MB | Report |
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| EGAF00002057801 | fq.gz | 2.5 MB | Report |
|
| EGAF00002057802 | fq.gz | 67.9 MB | Report |
|
| EGAF00002057803 | fq.gz | 114.8 MB | Report |
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| EGAF00002057804 | fq.gz | 117.3 MB | Report |
|
| EGAF00002057805 | fq.gz | 760.0 kB | Report |
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| EGAF00002057806 | fq.gz | 145.9 MB | Report |
|
| EGAF00002057807 | fq.gz | 174.7 MB | Report |
|
| EGAF00002057808 | fq.gz | 63.4 MB | Report |
|
| EGAF00002057809 | fq.gz | 65.7 MB | Report |
|
| EGAF00002057810 | fq.gz | 32.7 MB | Report |
|
| EGAF00002057811 | fq.gz | 260.3 MB | Report |
|
| EGAF00002057812 | fq.gz | 196.3 MB | Report |
|
| EGAF00002057813 | fq.gz | 244.7 MB | Report |
|
| EGAF00002057814 | fq.gz | 118.5 MB | Report |
|
| EGAF00002057815 | fq.gz | 99.8 MB | Report |
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| EGAF00002057816 | fq.gz | 98.7 MB | Report |
|
| EGAF00002057817 | fq.gz | 100.8 MB | Report |
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| EGAF00002057818 | fq.gz | 120.7 MB | Report |
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| EGAF00002057819 | fq.gz | 124.4 MB | Report |
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| EGAF00002057820 | fq.gz | 89.0 MB | Report |
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| EGAF00002057821 | fq.gz | 106.5 MB | Report |
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| EGAF00002057822 | fq.gz | 118.7 MB | Report |
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| EGAF00002057823 | fq.gz | 78.3 MB | Report |
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| EGAF00002057824 | fq.gz | 84.6 MB | Report |
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| EGAF00002057825 | fq.gz | 183.9 MB | Report |
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| EGAF00002057826 | fq.gz | 156.8 MB | Report |
|
| EGAF00002057827 | fq.gz | 114.4 MB | Report |
|
| EGAF00002057828 | fq.gz | 163.6 MB | Report |
|
| EGAF00002057829 | fq.gz | 252.9 MB | Report |
|
| EGAF00002057830 | fq.gz | 131.2 MB | Report |
|
| EGAF00002057831 | fq.gz | 49.3 MB | Report |
|
| EGAF00002057832 | fq.gz | 70.4 MB | Report |
|
| EGAF00002057833 | fq.gz | 97.4 MB | Report |
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| EGAF00002057834 | fq.gz | 49.8 MB | Report |
|
| EGAF00002057835 | fq.gz | 554.9 MB | Report |
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| EGAF00002057836 | fq.gz | 58.3 MB | Report |
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| EGAF00002057837 | fq.gz | 52.9 MB | Report |
|
| EGAF00002057838 | fq.gz | 196.7 MB | Report |
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| EGAF00002057839 | fq.gz | 64.0 MB | Report |
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| EGAF00002057840 | fq.gz | 59.1 MB | Report |
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| EGAF00002057841 | fq.gz | 61.2 MB | Report |
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| EGAF00002057842 | fq.gz | 117.6 MB | Report |
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| EGAF00002057843 | fq.gz | 72.4 MB | Report |
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| EGAF00002057844 | fq.gz | 91.5 MB | Report |
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| EGAF00002057845 | fq.gz | 50.3 MB | Report |
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| EGAF00002057846 | fq.gz | 36.1 MB | Report |
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| EGAF00002057847 | fq.gz | 43.4 MB | Report |
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| 86 Files (3.7 TB) | ||||