About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Primary breast cancers and paired brain metastases

Targeted next-generation-sequencing of 494 cancer-associated genes was done in a series of 14 frozen pairs of matched primary breast cancers and brain metastases (28 samples). DNA libraries of all coding exons were prepared using the Haloplex Target Enrichment System. Sequencing was done using the 2*150bp paired-end technology on the Illumina NextSeq500 platform.

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DAC policy breast cancer and paired brain metastases

Access to summary data and individual-level genotype data is available by submitting a free form application to the DAC. Access to data will be granted to qualified investigators for appropriate use.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001003173 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00002066569 fastq.gz 531.0 MB Report
EGAF00002066570 fastq.gz 546.9 MB Report
EGAF00002066571 fastq.gz 549.3 MB Report
EGAF00002066572 fastq.gz 561.8 MB Report
EGAF00002066573 fastq.gz 562.1 MB Report
EGAF00002066574 fastq.gz 576.6 MB Report
EGAF00002066575 fastq.gz 482.1 MB Report
EGAF00002066576 fastq.gz 500.0 MB Report
EGAF00002066577 fastq.gz 466.1 MB Report
EGAF00002066578 fastq.gz 482.8 MB Report
EGAF00002066579 fastq.gz 496.4 MB Report
EGAF00002066580 fastq.gz 489.7 MB Report
EGAF00002066581 fastq.gz 481.9 MB Report
EGAF00002066582 fastq.gz 495.8 MB Report
EGAF00002066583 fastq.gz 596.1 MB Report
EGAF00002066584 fastq.gz 608.2 MB Report
EGAF00002066585 fastq.gz 468.7 MB Report
EGAF00002066586 fastq.gz 477.6 MB Report
EGAF00002066587 fastq.gz 436.6 MB Report
EGAF00002066588 fastq.gz 451.2 MB Report
EGAF00002066589 fastq.gz 530.0 MB Report
EGAF00002066590 fastq.gz 540.4 MB Report
EGAF00002066591 fastq.gz 469.3 MB Report
EGAF00002066592 fastq.gz 479.8 MB Report
EGAF00002066593 fastq.gz 531.9 MB Report
EGAF00002066594 fastq.gz 537.3 MB Report
EGAF00002066595 fastq.gz 488.3 MB Report
EGAF00002066596 fastq.gz 500.4 MB Report
EGAF00002066597 fastq.gz 599.6 MB Report
EGAF00002066598 fastq.gz 610.7 MB Report
EGAF00002066599 fastq.gz 284.6 MB Report
EGAF00002066600 fastq.gz 286.3 MB Report
EGAF00002066601 fastq.gz 477.4 MB Report
EGAF00002066602 fastq.gz 492.6 MB Report
EGAF00002066603 fastq.gz 529.2 MB Report
EGAF00002066604 fastq.gz 541.7 MB Report
EGAF00002066605 fastq.gz 581.9 MB Report
EGAF00002066606 fastq.gz 595.2 MB Report
EGAF00002066607 fastq.gz 580.0 MB Report
EGAF00002066608 fastq.gz 594.0 MB Report
EGAF00002066609 fastq.gz 561.9 MB Report
EGAF00002066610 fastq.gz 573.2 MB Report
EGAF00002066611 fastq.gz 608.7 MB Report
EGAF00002066612 fastq.gz 618.8 MB Report
EGAF00002066613 fastq.gz 580.1 MB Report
EGAF00002066614 fastq.gz 589.2 MB Report
EGAF00002066615 fastq.gz 536.7 MB Report
EGAF00002066616 fastq.gz 546.7 MB Report
EGAF00002066617 fastq.gz 515.4 MB Report
EGAF00002066618 fastq.gz 528.4 MB Report
EGAF00002066619 fastq.gz 586.0 MB Report
EGAF00002066620 fastq.gz 596.7 MB Report
EGAF00002066621 fastq.gz 563.2 MB Report
EGAF00002066622 fastq.gz 574.2 MB Report
EGAF00002066623 fastq.gz 543.8 MB Report
EGAF00002066624 fastq.gz 556.6 MB Report
56 Files (29.6 GB)