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Ohio cohort (Illumina WGS) dataset for "Genomic landscape of oral cancers"

Whole-genome sequencing dataset from oral cancer samples using Illumina platform

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THE HPV VIROME CONSORTIUM - DATA ACCESS AND USE AGREEMENT

European Genome-Phenome Archive c/o European Bioinformatics Institute Wellcome Trust Genome Campus Hinxton Cambridge CB10 1SD United Kingdom To whom it may concern, This document refers to the data set, EGAS00001000599 (EGAD00001000691), which has been submitted to the European Genome Archive (EGA) for the restricted access by scientists working at legitimate academic institutions who have agreed to comply with the terms of a Data Access Agreement drafted by the HPV Virome Consortium Data Access Committee. There are a number of steps that a researcher must take to obtain access to this data. The process is overseen by our Data Access Committee, called the HPV Virome Consortium Data Access Committee. To reach the committee, please email Dr. David Symer at desymer@mdanderson.org or at desymer@icloud.com. Please be advised that we the undersigned investigators each are authorized to upload data to the EGA for archiving and distribution as part of your submission process, which will enable approved researchers to have encrypted access to the data. We confirm that this submission is consistent with the informed consent of the participants of the study and to the best of our knowledge is in accordance with applicable laws and regulations. Sincerely, David E. Symer, M.D., Ph.D. Maura L. Gillison, M.D., Ph.D. Keiko Akagi, Ph.D.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001003228 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00002191220 bam 170.5 GB
EGAF00002191221 bam 336.3 GB
EGAF00002191222 bam 170.1 GB
EGAF00002191223 bam 335.2 GB
EGAF00002191224 bam 185.1 GB
EGAF00002191225 bam 328.3 GB
EGAF00002191226 bam 154.8 GB
EGAF00002191227 bam 297.6 GB
EGAF00002191228 bam 153.9 GB
EGAF00002191229 bam 284.8 GB
EGAF00002191230 bam 151.2 GB
EGAF00002191231 bam 306.1 GB
EGAF00002191232 bam 178.2 GB
EGAF00002191233 bam 355.6 GB
EGAF00002191234 bam 145.6 GB
EGAF00002191235 bam 316.8 GB
EGAF00002191236 bam 139.2 GB
EGAF00002191237 bam 339.6 GB
EGAF00002191238 bam 195.9 GB
EGAF00002191239 bam 345.9 GB
EGAF00002191240 bam 142.6 GB
EGAF00002191241 bam 329.0 GB
EGAF00002191242 bam 154.4 GB
EGAF00002191243 bam 319.0 GB
EGAF00002191244 bam 145.1 GB
EGAF00002191245 bam 304.0 GB
EGAF00002191246 bam 131.8 GB
EGAF00002191247 bam 311.5 GB
EGAF00002191248 bam 155.3 GB
EGAF00002191249 bam 293.2 GB
EGAF00002191250 bam 146.4 GB
EGAF00002191251 bam 321.4 GB
EGAF00002191252 bam 147.2 GB
EGAF00002191253 bam 337.6 GB
EGAF00002191254 bam 140.9 GB
EGAF00002191255 bam 352.8 GB
EGAF00002191256 bam 154.9 GB
EGAF00002191257 bam 348.1 GB
EGAF00002191258 bam 157.1 GB
EGAF00002191259 bam 330.5 GB
EGAF00002191260 bam 170.8 GB
EGAF00002191261 bam 308.8 GB
EGAF00002191262 bam 157.4 GB
EGAF00002191263 bam 373.9 GB
EGAF00002191264 bam 157.6 GB
EGAF00002191265 bam 350.2 GB
EGAF00002191266 bam 170.6 GB
EGAF00002191267 bam 327.4 GB
EGAF00002191268 bam 239.5 GB
EGAF00002191269 bam 411.4 GB
EGAF00002191270 bam 217.3 GB
EGAF00002191271 bam 515.0 GB
EGAF00002191272 bam 233.2 GB
EGAF00002191273 bam 412.2 GB
EGAF00002191274 bam 233.7 GB
EGAF00002191275 bam 429.8 GB
EGAF00002191276 bam 242.6 GB
EGAF00002191277 bam 437.6 GB
EGAF00002191278 bam 282.6 GB
EGAF00002191279 bam 428.2 GB
EGAF00002191280 bam 416.9 GB
EGAF00002191281 bam 232.1 GB
EGAF00002191282 bam 215.6 GB
EGAF00002191283 bam 463.7 GB
EGAF00002191284 bam 216.2 GB
EGAF00002191285 bam 462.9 GB
EGAF00002191286 bam 224.2 GB
EGAF00002191287 bam 418.1 GB
EGAF00002191288 bam 235.9 GB
EGAF00002191289 bam 484.7 GB
EGAF00002191290 bam 210.9 GB
EGAF00002191291 bam 437.9 GB
EGAF00002191292 bam 249.7 GB
EGAF00002191293 bam 422.9 GB
EGAF00002191294 bam 239.0 GB
EGAF00002191295 bam 445.6 GB
EGAF00002191296 bam 216.5 GB
EGAF00002191297 bam 457.2 GB
EGAF00002191298 bam 280.1 GB
EGAF00002191299 bam 330.3 GB
EGAF00002191300 bam 227.6 GB
EGAF00002191301 bam 421.8 GB
EGAF00002191302 bam 259.0 GB
EGAF00002191303 bam 416.5 GB
EGAF00002191304 bam 257.0 GB
EGAF00002191305 bam 432.0 GB
EGAF00002191306 bam 182.9 GB
EGAF00002191307 bam 365.8 GB
EGAF00002191308 bam 156.7 GB
EGAF00002191309 bam 320.0 GB
EGAF00002191310 bam 157.6 GB
EGAF00002191311 bam 370.5 GB
EGAF00002191312 bam 177.5 GB
EGAF00002191313 bam 367.8 GB
EGAF00002191314 bam 185.2 GB
EGAF00002191315 bam 361.7 GB
EGAF00002191316 bam 139.9 GB
EGAF00002191317 bam 347.1 GB
EGAF00002191318 bam 119.9 GB
EGAF00002191319 bam 390.3 GB
EGAF00002191320 bam 146.2 GB
EGAF00002191321 bam 358.2 GB
EGAF00002191322 bam 179.7 GB
EGAF00002191323 bam 346.4 GB
EGAF00002191324 bam 171.5 GB
EGAF00002191325 bam 304.2 GB
106 Files (29.5 TB)