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WGBS files for PCGP NBL_MYCN_ATRX

WGBS files for PCGP NBL_MYCN_ATRX paper titled "MYCN Amplification and ATRX Mutations are Incompatible in Neuroblastoma"

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DUO:0000042
version: 2019-01-07

general research use

This data use permission indicates that use is allowed for general research use for any research purpose.

DAC to obtain datasets submitted by St. Jude Children's Research Hospital - Washington University Pediatric Cancer Genome Project

Learn more about the PCGP, disease types, publications, the PCGP Data Access Committee, and instructions to access data via EGA: https://pecan.stjude.cloud/permalink/pcgp Complete the attached Data Access Agreement (DAA), adhering to the following guidance, and return it to pcgpdaccoordinator@stjude.org: - Requests must be made for individual datasets (EGAD ID), not full studies (EGAS ID). - A separate DAA must be submitted for each dataset AND all original pages must be included. - The first listed applicant should be the Principal Investigator, Head of Department, or Department Chair leading the project. This should not be a staff scientist or postdoctoral researcher. - The email address used to access the dataset(s) must be a work-related email, not a personal email. - The signature of the “Institutional or Administrative Authority” must be an individual with the authority to sign documents on behalf of the requesting institution. This individual is known as the Authorized Organizational Representative (AOR) and is typically someone in the requesting institution's legal department or grants office. Heads/Chairs of Departments cannot sign as the Institutional or Administrative Authority. - Not adhering to these policies will delay your application. Once we receive your completed application, the DAC review typically takes approximately 15-20 business days. - If we do not receive a completed DAA from you within 90 days, we will consider this application closed and reject your request in the EGA portal. You may resubmit later as needed.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001003257 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF00002319085 bam 176.0 GB Report
EGAF00002319086 bam 78.0 GB Report
EGAF00002319087 bam 74.0 GB Report
EGAF00002319088 bam 52.2 GB Report
EGAF00002319089 bam 73.8 GB Report
EGAF00002319090 bam 65.2 GB Report
EGAF00002319091 bam 92.1 GB Report
EGAF00002319092 bam 70.0 GB Report
EGAF00002319093 bam 62.5 GB Report
EGAF00002319094 bam 57.2 GB Report
EGAF00002319095 bam 47.2 GB Report
EGAF00002319096 bam 169.0 GB Report
EGAF00002319097 bam 175.7 GB Report
EGAF00002319098 bam 162.2 GB Report
EGAF00002319099 bam 59.7 GB Report
EGAF00002319100 bam 164.3 GB Report
EGAF00002319101 bam 163.9 GB Report
EGAF00002319102 bam 160.4 GB Report
EGAF00002319103 bam 164.1 GB Report
EGAF00002319104 bam 83.6 GB Report
EGAF00002319105 bam 86.7 GB Report
EGAF00002319106 bam 59.5 GB Report
EGAF00002319107 bam 63.5 GB Report
EGAF00002319108 bam 102.1 GB Report
24 Files (2.5 TB)