About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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macIDR validation data

RNA-seq of 24 M-CSF differentiated human peripheral monocyte-derived macrophages (MDMs) activated with short exposure (3hours) to LPS, or long exposure (24 hours) to LPS, LPS with IFNγ, IFNγ, IL-4, IL-10, and dexamethasone.

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Controlled access to data generated at the AMC Macrophage group

- The User Institution agrees to protect the confidentiality of Research Participants in any research papers or publications that they prepare by taking all reasonable care to limit the possibility of identification. - The User Institution agrees not to link or combine these Data to other information or archived data available in a way that could re-identify the Research Participants, even if access to that data has been formally granted to the User Institution or is freely available without restriction. Any user requesting access to the data generated at the AMC Macrophage group must apply for authorization, which is granted by the AMC Macrophage Data Access Committee (DAC). Decisions to grant access are made based on whether the request conforms to the specifications within the Data Access Agreement

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001003451 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00002372325 fastq.gz 503.7 MB Report
EGAF00002372326 fastq.gz 532.7 MB Report
EGAF00002372327 fastq.gz 486.3 MB Report
EGAF00002372328 fastq.gz 500.3 MB Report
EGAF00002372329 fastq.gz 478.5 MB Report
EGAF00002372330 fastq.gz 503.8 MB Report
EGAF00002372331 fastq.gz 443.4 MB Report
EGAF00002372332 fastq.gz 550.9 MB Report
EGAF00002372333 fastq.gz 438.8 MB Report
EGAF00002372334 fastq.gz 460.2 MB Report
EGAF00002372335 fastq.gz 444.7 MB Report
EGAF00002372336 fastq.gz 401.7 MB Report
EGAF00002372337 fastq.gz 571.8 MB Report
EGAF00002372338 fastq.gz 512.5 MB Report
EGAF00002372339 fastq.gz 523.3 MB Report
EGAF00002372340 fastq.gz 484.9 MB Report
EGAF00002372341 fastq.gz 450.6 MB Report
EGAF00002372342 fastq.gz 465.3 MB Report
EGAF00002372343 fastq.gz 462.9 MB Report
EGAF00002372344 fastq.gz 502.1 MB Report
EGAF00002372345 fastq.gz 534.1 MB Report
EGAF00002372346 fastq.gz 488.7 MB Report
EGAF00002372347 fastq.gz 505.9 MB Report
EGAF00002372348 fastq.gz 476.4 MB Report
24 Files (11.7 GB)