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Dataset

Whole genome sequencing of cfDNA

Dataset ID	Technology	Samples
EGAD00001005343	Illumina NovaSeq 6000,NextSeq 550	41

Dataset Description

random whole-genome shotgun sequencing of cfDNA in control samples (NPH*) and late-stage cancer samples. First letter denotes primary cancer tissue (C: Colon, B: Breast, P: Prostate)

Data Use Conditions

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Label	Code	Version	Modifier
disease specific research	DUO:0000007	2019-01-07	MONDO:0005575, MONDO:0007254, MONDO:0008315

Who controls access to this dataset

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact:

DAC CTC - Plasma-DNA
Contact person: Ellen Heitzer
Email: ellen [dot] heitzer [at] medunigraz [dot] at
More details: EGAC00001000072

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This dataset is featured in 1 study

Studies are experimental investigations of a particular phenomenon. e.g. case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients. Click on one of the Study IDs below to find out more.

Study ID	Study Title	Study Type
EGAS00001003206	Inference of transcription factor binding from cell-free DNA enables tumor subtype prediction and early detection	Other

EGA Beacon