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Whole genome sequencing of cfDNA

random whole-genome shotgun sequencing of cfDNA in control samples (NPH*) and late-stage cancer samples. First letter denotes primary cancer tissue (C: Colon, B: Breast, P: Prostate)

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CTC - Plasma-DNA - 3 MONDO ontologies

European Genome-Phenome Archive c/o European Bioinformatics Institute Wellcome Trust Genome Campus Hinxton Cambridge CB10 1SD United Kingdom To whom it may concern, This document refers to datasets with MONDO:0007254, MONDO:0005575, MONDO:0008315 which has been submitted to the European Genome Archive (EGA) for the restricted access by legitimate academic institutions that have agreed to comply with the terms of a Data Access Agreement drafted by Ellen Heitzer. There are a number of steps that a researcher must take to obtain access to this data and the process is overseen by Ellen Heitzer Ellen Heitzer is a Postdoctoral Fellow and is authorized to approve researchers to have encrypted access to the data submitted to the EGA. Please be advised that Ellen Heitzer (ellen.heitzer@medunigraz.at) is authorized to upload data to the EGA for archiving and distribution as part of your submission process, which will enable approved researchers to have encrypted access to the data. We can confirm that this submission is consistent with the informed consent of the participants of the study or has been granted ethical approval and is in accordance with the applicable laws and regulations. Sincerely, Michael R. Speicher Principle Investigator

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001003206 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00002728964 bam 50.7 GB
EGAF00002728965 bam 47.6 GB
EGAF00002728966 bam 40.5 GB
EGAF00002728967 bam 54.6 GB
EGAF00002728968 bam 46.8 GB
EGAF00002728969 bam 42.0 GB
EGAF00002728970 bam 41.3 GB
EGAF00002728971 bam 48.5 GB
EGAF00002728972 bam 42.0 GB
EGAF00002728973 bam 38.6 GB
EGAF00002728974 bam 41.9 GB
EGAF00002728975 bam 43.5 GB
EGAF00002728976 bam 42.7 GB
EGAF00002728977 bam 57.3 GB
EGAF00002728978 bam 43.2 GB
EGAF00002728979 bam 52.4 GB
EGAF00002728980 bam 38.1 GB
EGAF00002728981 bam 49.3 GB
EGAF00002728982 bam 46.0 GB
EGAF00002728983 bam 41.3 GB
EGAF00002728984 bam 51.1 GB
EGAF00002728985 bam 46.3 GB
EGAF00002728986 bam 55.2 GB
EGAF00002728987 bam 43.3 GB
EGAF00002728988 bam 5.9 GB
EGAF00002728989 bam 7.0 GB
EGAF00002728990 bam 6.6 GB
EGAF00002728991 bam 6.5 GB
EGAF00002728992 fastq.gz 30.1 GB
EGAF00002728993 fastq.gz 62.4 GB
EGAF00002728994 fastq.gz 43.1 GB
EGAF00002728995 fastq.gz 31.7 GB
EGAF00002728996 fastq.gz 27.5 GB
EGAF00002728997 fastq.gz 44.4 GB
EGAF00002728998 fastq.gz 62.1 GB
EGAF00002728999 fastq.gz 41.7 GB
EGAF00002729000 fastq.gz 38.0 GB
EGAF00002729001 fastq.gz 57.6 GB
EGAF00002729002 fastq.gz 53.8 GB
EGAF00002729003 fastq.gz 45.9 GB
EGAF00002729004 fastq.gz 44.9 GB
EGAF00002729005 fastq.gz 18.6 GB
42 Files (1.7 TB)