About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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WGS data of patients diagnosed with angiosarcoma

Whole-genome sequencing (WGS) was performed for 13 pairs of tumor-normal and 5 tumor-only samples from patients diagnosed with angiosarcoma. Genomic DNA from tumor tissue was extracted with QIAamp DNA Mini Kit. The DNA for the matching normal was obtained from blood or buccal swabs and purified by Blood and Cell Culture DNA Mini kit or E.Z.N.A. Tissue DNA Kit (Omega Bio-tek) according to manufacturer’s instructions. The quantity and quality were assessed by Quant-iT PicoGreen dsDNA Assay Kit (Invitrogen) and agarose gel electrophoresis. All sequencing libraries were prepared using TruSeq Nano DNA Library Prep Kit (Illumina). Paired-end sequencing was performed on Illumina HiSeq X Ten as 2x151 bp.

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Data access policy for Angiosarcoma study. National Cancer Centre Singapore

Contact corresponding author for data access.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001003895 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00002796667 fastq.gz 40.7 GB Report
EGAF00002796668 fastq.gz 40.2 GB Report
EGAF00002796669 fastq.gz 93.2 GB Report
EGAF00002796670 fastq.gz 99.6 GB Report
EGAF00002796671 fastq.gz 56.6 GB Report
EGAF00002796672 fastq.gz 62.5 GB Report
EGAF00002796673 fastq.gz 60.6 GB Report
EGAF00002796674 fastq.gz 67.1 GB Report
EGAF00002796675 fastq.gz 62.2 GB Report
EGAF00002796676 fastq.gz 67.8 GB Report
EGAF00002796677 fastq.gz 66.3 GB Report
EGAF00002796678 fastq.gz 73.2 GB Report
EGAF00002796679 fastq.gz 72.3 GB Report
EGAF00002796680 fastq.gz 78.6 GB Report
EGAF00002796681 fastq.gz 67.0 GB Report
EGAF00002796682 fastq.gz 74.4 GB Report
EGAF00002796683 fastq.gz 62.3 GB Report
EGAF00002796684 fastq.gz 68.4 GB Report
EGAF00002796685 fastq.gz 55.4 GB Report
EGAF00002796686 fastq.gz 61.6 GB Report
EGAF00002796687 fastq.gz 55.3 GB Report
EGAF00002796688 fastq.gz 61.5 GB Report
EGAF00002796689 fastq.gz 61.0 GB Report
EGAF00002796690 fastq.gz 66.6 GB Report
EGAF00002796691 fastq.gz 56.0 GB Report
EGAF00002796692 fastq.gz 56.6 GB Report
EGAF00002796693 fastq.gz 51.2 GB Report
EGAF00002796694 fastq.gz 58.4 GB Report
EGAF00002796695 fastq.gz 59.5 GB Report
EGAF00002796696 fastq.gz 65.3 GB Report
EGAF00002796697 fastq.gz 74.1 GB Report
EGAF00002796698 fastq.gz 81.4 GB Report
EGAF00002796699 fastq.gz 60.8 GB Report
EGAF00002796700 fastq.gz 61.3 GB Report
EGAF00002796701 fastq.gz 57.8 GB Report
EGAF00002796702 fastq.gz 63.8 GB Report
EGAF00002796703 fastq.gz 77.0 GB Report
EGAF00002796704 fastq.gz 77.4 GB Report
EGAF00002796705 fastq.gz 37.2 GB Report
EGAF00002796706 fastq.gz 38.1 GB Report
EGAF00002796707 fastq.gz 29.7 GB Report
EGAF00002796708 fastq.gz 33.1 GB Report
EGAF00002796709 fastq.gz 28.4 GB Report
EGAF00002796710 fastq.gz 31.8 GB Report
EGAF00002796711 fastq.gz 30.8 GB Report
EGAF00002796712 fastq.gz 33.4 GB Report
EGAF00002796713 fastq.gz 29.4 GB Report
EGAF00002796714 fastq.gz 32.4 GB Report
EGAF00002796715 fastq.gz 67.4 GB Report
EGAF00002796716 fastq.gz 74.2 GB Report
EGAF00002796717 fastq.gz 31.1 GB Report
EGAF00002796718 fastq.gz 34.0 GB Report
EGAF00002796719 fastq.gz 57.6 GB Report
EGAF00002796720 fastq.gz 58.1 GB Report
EGAF00002796721 fastq.gz 33.9 GB Report
EGAF00002796722 fastq.gz 37.9 GB Report
EGAF00002796723 fastq.gz 32.2 GB Report
EGAF00002796724 fastq.gz 35.2 GB Report
EGAF00002796725 fastq.gz 30.0 GB Report
EGAF00002796726 fastq.gz 33.2 GB Report
EGAF00002796727 fastq.gz 30.4 GB Report
EGAF00002796728 fastq.gz 33.7 GB Report
62 Files (3.4 TB)