About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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16S data from IBD patients

Bacterial 16S V4 rDNA was amplified using two differently barcoded V4 fusion primers. Pooled PCR samples were purified and paired-end sequenced on MiSeq instrument for 250 cycles. The steps from DNA quantification to sequencing were conducted at Second Genome Inc.

Request Access

DUO:0000005
version: 2019-01-07

general research use and clinical care

This data use limitation indicates that use is allowed for health/medical/biomedical purposes and other biological research, including the study of population origins or ancestry.

If you want access to the data of this project, please contact Judith Pignac-Kobinger(jpignac@med.miami.edu)

Application for Access to 16S Sequencing Data Applications for access to data can be submitted at any time. The UMiami Gastro team Data Access Committee will consider applications on a rolling basis and aim to provide a decision within 2 months of receipt. Name of applicant co-applicant(s) and Principle investigator including affiliations and contact details. Title of Project Sequencing Data Requested Please provide a clear description of the project and its specific aims in no more than 750 words. This should include specific details of what you plan to do with the data. (Use separate page) I have read, completed and returned the UMiami Gastro data access agreement Signed: Name: Date:

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001003105 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00002044551 fastq.gz 75.5 MB Report
EGAF00002044552 fastq.gz 83.2 MB Report
EGAF00002044553 fastq.gz 45.7 MB Report
EGAF00002044554 fastq.gz 50.8 MB Report
EGAF00002044555 fastq.gz 69.7 MB Report
EGAF00002044556 fastq.gz 76.4 MB Report
EGAF00002044557 fastq.gz 45.8 MB Report
EGAF00002044558 fastq.gz 50.4 MB Report
EGAF00002044559 fastq.gz 55.5 MB Report
EGAF00002044560 fastq.gz 49.8 MB Report
EGAF00002044561 fastq.gz 73.5 MB Report
EGAF00002044562 fastq.gz 66.6 MB Report
EGAF00002044563 fastq.gz 84.7 MB Report
EGAF00002044564 fastq.gz 77.3 MB Report
EGAF00002044565 fastq.gz 91.1 MB Report
EGAF00002044566 fastq.gz 85.4 MB Report
EGAF00002044567 fastq.gz 59.5 MB Report
EGAF00002044568 fastq.gz 66.9 MB Report
EGAF00002044569 fastq.gz 74.9 MB Report
EGAF00002044570 fastq.gz 83.0 MB Report
EGAF00002044571 fastq.gz 34.8 MB Report
EGAF00002044572 fastq.gz 39.1 MB Report
EGAF00002044573 fastq.gz 26.0 MB Report
EGAF00002044574 fastq.gz 29.9 MB Report
EGAF00002044575 fastq.gz 44.1 MB Report
EGAF00002044576 fastq.gz 49.9 MB Report
EGAF00002044577 fastq.gz 47.0 MB Report
EGAF00002044578 fastq.gz 41.3 MB Report
EGAF00002044579 fastq.gz 18.9 MB Report
EGAF00002044580 fastq.gz 16.8 MB Report
EGAF00002044581 fastq.gz 64.7 MB Report
EGAF00002044582 fastq.gz 58.5 MB Report
EGAF00002044583 fastq.gz 39.0 MB Report
EGAF00002044584 fastq.gz 44.3 MB Report
EGAF00002044585 fastq.gz 41.6 MB Report
EGAF00002044586 fastq.gz 36.5 MB Report
EGAF00002044587 fastq.gz 58.8 MB Report
EGAF00002044588 fastq.gz 65.3 MB Report
EGAF00002044589 fastq.gz 45.0 MB Report
EGAF00002044590 fastq.gz 39.1 MB Report
EGAF00002044591 fastq.gz 50.6 MB Report
EGAF00002044592 fastq.gz 43.5 MB Report
EGAF00002044593 fastq.gz 35.9 MB Report
EGAF00002044594 fastq.gz 31.1 MB Report
EGAF00002044595 fastq.gz 43.9 MB Report
EGAF00002044596 fastq.gz 49.9 MB Report
EGAF00002044597 fastq.gz 46.6 MB Report
EGAF00002044598 fastq.gz 52.0 MB Report
EGAF00002044599 fastq.gz 38.9 MB Report
EGAF00002044600 fastq.gz 44.1 MB Report
EGAF00002044601 fastq.gz 48.7 MB Report
EGAF00002044602 fastq.gz 44.7 MB Report
EGAF00002044603 fastq.gz 62.7 MB Report
EGAF00002044604 fastq.gz 56.3 MB Report
EGAF00002044605 fastq.gz 51.2 MB Report
EGAF00002044606 fastq.gz 48.8 MB Report
EGAF00002044607 fastq.gz 73.0 MB Report
EGAF00002044608 fastq.gz 66.4 MB Report
EGAF00002044609 fastq.gz 57.4 MB Report
EGAF00002044610 fastq.gz 51.6 MB Report
EGAF00002044611 fastq.gz 53.2 MB Report
EGAF00002044612 fastq.gz 59.2 MB Report
EGAF00002044613 fastq.gz 37.3 MB Report
EGAF00002044614 fastq.gz 42.2 MB Report
EGAF00002044615 fastq.gz 61.9 MB Report
EGAF00002044616 fastq.gz 54.6 MB Report
EGAF00002044617 fastq.gz 27.6 MB Report
EGAF00002044618 fastq.gz 24.5 MB Report
EGAF00002044619 fastq.gz 62.5 MB Report
EGAF00002044620 fastq.gz 56.4 MB Report
EGAF00002044621 fastq.gz 45.2 MB Report
EGAF00002044622 fastq.gz 51.1 MB Report
EGAF00002044623 fastq.gz 40.7 MB Report
EGAF00002044624 fastq.gz 36.3 MB Report
EGAF00002044625 fastq.gz 43.0 MB Report
EGAF00002044626 fastq.gz 36.4 MB Report
EGAF00002044627 fastq.gz 17.2 MB Report
EGAF00002044628 fastq.gz 15.0 MB Report
EGAF00002044629 fastq.gz 46.4 MB Report
EGAF00002044630 fastq.gz 52.7 MB Report
EGAF00002044631 fastq.gz 46.8 MB Report
EGAF00002044632 fastq.gz 40.8 MB Report
EGAF00002044633 fastq.gz 48.4 MB Report
EGAF00002044634 fastq.gz 42.5 MB Report
EGAF00002044635 fastq.gz 34.3 MB Report
EGAF00002044636 fastq.gz 39.1 MB Report
EGAF00002044637 fastq.gz 42.5 MB Report
EGAF00002044638 fastq.gz 48.5 MB Report
EGAF00002044639 fastq.gz 54.8 MB Report
EGAF00002044640 fastq.gz 49.3 MB Report
EGAF00002044641 fastq.gz 50.9 MB Report
EGAF00002044642 fastq.gz 45.1 MB Report
EGAF00002044643 fastq.gz 64.8 MB Report
EGAF00002044644 fastq.gz 57.6 MB Report
EGAF00002044645 fastq.gz 68.4 MB Report
EGAF00002044646 fastq.gz 75.8 MB Report
EGAF00002044647 fastq.gz 48.7 MB Report
EGAF00002044648 fastq.gz 44.4 MB Report
EGAF00002044649 fastq.gz 72.4 MB Report
EGAF00002044650 fastq.gz 64.9 MB Report
EGAF00002044651 fastq.gz 71.0 MB Report
EGAF00002044652 fastq.gz 78.7 MB Report
EGAF00002044653 fastq.gz 55.2 MB Report
EGAF00002044654 fastq.gz 56.9 MB Report
EGAF00002044655 fastq.gz 52.9 MB Report
EGAF00002044656 fastq.gz 47.4 MB Report
EGAF00002044657 fastq.gz 62.0 MB Report
EGAF00002044658 fastq.gz 56.1 MB Report
EGAF00002044659 fastq.gz 63.8 MB Report
EGAF00002044660 fastq.gz 57.5 MB Report
EGAF00002044661 fastq.gz 63.9 MB Report
EGAF00002044662 fastq.gz 56.9 MB Report
EGAF00002044663 fastq.gz 39.0 MB Report
EGAF00002044664 fastq.gz 33.7 MB Report
EGAF00002044665 fastq.gz 23.9 MB Report
EGAF00002044666 fastq.gz 27.7 MB Report
EGAF00002044667 fastq.gz 30.8 MB Report
EGAF00002044668 fastq.gz 26.5 MB Report
EGAF00002044669 fastq.gz 21.9 MB Report
EGAF00002044670 fastq.gz 25.2 MB Report
EGAF00002044671 fastq.gz 60.6 MB Report
EGAF00002044672 fastq.gz 67.5 MB Report
EGAF00002044673 fastq.gz 55.6 MB Report
EGAF00002044674 fastq.gz 61.6 MB Report
EGAF00002044675 fastq.gz 22.5 MB Report
EGAF00002044676 fastq.gz 20.0 MB Report
EGAF00002044677 fastq.gz 48.8 MB Report
EGAF00002044678 fastq.gz 55.4 MB Report
EGAF00002044679 fastq.gz 45.0 MB Report
EGAF00002044680 fastq.gz 52.4 MB Report
EGAF00002044681 fastq.gz 44.2 MB Report
EGAF00002044682 fastq.gz 49.4 MB Report
EGAF00002044683 fastq.gz 28.0 MB Report
EGAF00002044684 fastq.gz 32.2 MB Report
EGAF00002044685 fastq.gz 57.7 MB Report
EGAF00002044686 fastq.gz 51.6 MB Report
EGAF00002044687 fastq.gz 9.5 MB Report
EGAF00002044688 fastq.gz 10.9 MB Report
EGAF00002044689 fastq.gz 33.4 MB Report
EGAF00002044690 fastq.gz 37.7 MB Report
EGAF00002044691 fastq.gz 35.0 MB Report
EGAF00002044692 fastq.gz 31.1 MB Report
EGAF00002044693 fastq.gz 76.7 MB Report
EGAF00002044694 fastq.gz 84.5 MB Report
EGAF00002044695 fastq.gz 52.1 MB Report
EGAF00002044696 fastq.gz 58.8 MB Report
EGAF00002044697 fastq.gz 31.1 MB Report
EGAF00002044698 fastq.gz 34.9 MB Report
EGAF00002044699 fastq.gz 51.6 MB Report
EGAF00002044700 fastq.gz 56.8 MB Report
EGAF00002044701 fastq.gz 58.3 MB Report
EGAF00002044702 fastq.gz 49.9 MB Report
EGAF00002044703 fastq.gz 40.7 MB Report
EGAF00002044704 fastq.gz 45.6 MB Report
EGAF00002044705 fastq.gz 30.0 MB Report
EGAF00002044706 fastq.gz 33.6 MB Report
EGAF00002044707 fastq.gz 46.2 MB Report
EGAF00002044708 fastq.gz 52.9 MB Report
EGAF00002044709 fastq.gz 23.3 MB Report
EGAF00002044710 fastq.gz 26.2 MB Report
EGAF00002044711 fastq.gz 44.5 MB Report
EGAF00002044712 fastq.gz 49.6 MB Report
EGAF00002044713 fastq.gz 50.4 MB Report
EGAF00002044714 fastq.gz 45.2 MB Report
EGAF00002044715 fastq.gz 12.3 MB Report
EGAF00002044716 fastq.gz 13.9 MB Report
EGAF00002044717 fastq.gz 72.7 MB Report
EGAF00002044718 fastq.gz 65.9 MB Report
EGAF00002044719 fastq.gz 64.3 MB Report
EGAF00002044720 fastq.gz 71.6 MB Report
EGAF00002044721 fastq.gz 50.7 MB Report
EGAF00002044722 fastq.gz 57.1 MB Report
EGAF00002044723 fastq.gz 29.3 MB Report
EGAF00002044724 fastq.gz 32.8 MB Report
EGAF00002044725 fastq.gz 51.9 MB Report
EGAF00002044726 fastq.gz 46.7 MB Report
EGAF00002044727 fastq.gz 27.7 MB Report
EGAF00002044728 fastq.gz 24.7 MB Report
EGAF00002044729 fastq.gz 23.7 MB Report
EGAF00002044730 fastq.gz 20.7 MB Report
EGAF00002044731 fastq.gz 24.6 MB Report
EGAF00002044732 fastq.gz 21.4 MB Report
EGAF00002044733 fastq.gz 11.1 MB Report
EGAF00002044734 fastq.gz 13.0 MB Report
EGAF00002044735 fastq.gz 42.9 MB Report
EGAF00002044736 fastq.gz 47.6 MB Report
EGAF00002044737 fastq.gz 53.9 MB Report
EGAF00002044738 fastq.gz 47.7 MB Report
EGAF00002044739 fastq.gz 36.1 MB Report
EGAF00002044740 fastq.gz 39.9 MB Report
EGAF00002044741 fastq.gz 31.2 MB Report
EGAF00002044742 fastq.gz 36.3 MB Report
EGAF00002044743 fastq.gz 42.9 MB Report
EGAF00002044744 fastq.gz 38.1 MB Report
EGAF00002044745 fastq.gz 34.2 MB Report
EGAF00002044746 fastq.gz 30.3 MB Report
EGAF00002044747 fastq.gz 12.7 MB Report
EGAF00002044748 fastq.gz 11.3 MB Report
EGAF00002044749 fastq.gz 42.6 MB Report
EGAF00002044750 fastq.gz 47.8 MB Report
EGAF00002044751 fastq.gz 49.9 MB Report
EGAF00002044752 fastq.gz 44.5 MB Report
EGAF00002044753 fastq.gz 47.4 MB Report
EGAF00002044754 fastq.gz 52.7 MB Report
EGAF00002044755 fastq.gz 41.4 MB Report
EGAF00002044756 fastq.gz 46.9 MB Report
EGAF00002044757 fastq.gz 13.3 MB Report
EGAF00002044758 fastq.gz 11.6 MB Report
EGAF00002044759 fastq.gz 78.7 MB Report
EGAF00002044760 fastq.gz 72.8 MB Report
EGAF00002044761 fastq.gz 60.7 MB Report
EGAF00002044762 fastq.gz 55.1 MB Report
EGAF00002044763 fastq.gz 69.0 MB Report
EGAF00002044764 fastq.gz 62.0 MB Report
EGAF00002044765 fastq.gz 27.4 MB Report
EGAF00002044766 fastq.gz 24.4 MB Report
EGAF00002044767 fastq.gz 72.6 MB Report
EGAF00002044768 fastq.gz 66.7 MB Report
EGAF00002053509 fastq.gz 110.0 MB Report
EGAF00002053510 fastq.gz 101.7 MB Report
220 Files (10.5 GB)