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Dataset

16S data from IBD patients

Dataset ID	Technology	Samples
EGAD00001005482	Illumina MiSeq	109

Dataset Description

Bacterial 16S V4 rDNA was amplified using two differently barcoded V4 fusion primers. Pooled PCR samples were purified and paired-end sequenced on MiSeq instrument for 250 cycles. The steps from DNA quantification to sequencing were conducted at Second Genome Inc.

Data Use Conditions

GRU

See further information on Data Use Conditions

Label	Code	Version	Modifier
obsolete general research use and clinical care	DUO:0000005	2019-01-07

Who controls access to this dataset

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact:

Umiami Gastro team
Contact person: Maria T Abreu
Email: gxa472 [at] med [dot] miami [dot] edu
More details: EGAC00001001374

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This dataset is featured in 1 study

Studies are experimental investigations of a particular phenomenon. e.g. case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients. Click on one of the Study IDs below to find out more.

Study ID	Study Title	Study Type
EGAS00001003105	Microbial signatures and innate immune gene expression in lamina propria phagocytes of inflammatory bowel diseases patients	Other

EGA Beacon