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The effect of blood tube and time delay on the genome-wide methylation pattern of cfDNA

In this study, we evaluated the effect of preservation agens on the effect of the methylation pattern of cell-free DNA. The methylation pattern was assessed with cell-free reduced representation sequencing (cf-RRBS). All 45 samples were sequenced on a NovaSeq6000, and samples are provided as raw fastq files.

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DAC for the Center of Medical Genetics Gent.

Data requests are handled by the Center for Medical Genetics Gent and the legal department of Ghent University. A data-transfer agreement will have to be signed in order for the data to be transferred.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001004271 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00003471653 fastq.gz 875.3 MB
EGAF00003471654 fastq.gz 890.6 MB
EGAF00003471655 fastq.gz 886.0 MB
EGAF00003471656 fastq.gz 914.9 MB
EGAF00003471657 fastq.gz 768.7 MB
EGAF00003471658 fastq.gz 819.0 MB
EGAF00003471659 fastq.gz 868.3 MB
EGAF00003471660 fastq.gz 872.1 MB
EGAF00003471661 fastq.gz 828.9 MB
EGAF00003471662 fastq.gz 884.8 MB
EGAF00003471663 fastq.gz 793.4 MB
EGAF00003471664 fastq.gz 830.0 MB
EGAF00003471665 fastq.gz 753.1 MB
EGAF00003471666 fastq.gz 785.1 MB
EGAF00003471667 fastq.gz 945.0 MB
EGAF00003471668 fastq.gz 1.0 GB
EGAF00003471669 fastq.gz 883.1 MB
EGAF00003471670 fastq.gz 930.7 MB
EGAF00003471671 fastq.gz 617.1 MB
EGAF00003471672 fastq.gz 643.5 MB
EGAF00003471673 fastq.gz 655.3 MB
EGAF00003471674 fastq.gz 709.7 MB
EGAF00003471675 fastq.gz 687.8 MB
EGAF00003471676 fastq.gz 718.7 MB
EGAF00003471677 fastq.gz 506.5 MB
EGAF00003471678 fastq.gz 527.6 MB
EGAF00003471679 fastq.gz 578.2 MB
EGAF00003471680 fastq.gz 603.9 MB
EGAF00003471681 fastq.gz 663.8 MB
EGAF00003471682 fastq.gz 673.1 MB
EGAF00003471683 fastq.gz 615.5 MB
EGAF00003471684 fastq.gz 636.9 MB
EGAF00003471685 fastq.gz 535.1 MB
EGAF00003471686 fastq.gz 550.9 MB
EGAF00003471687 fastq.gz 553.6 MB
EGAF00003471688 fastq.gz 587.4 MB
EGAF00003471689 fastq.gz 588.5 MB
EGAF00003471690 fastq.gz 598.6 MB
EGAF00003471691 fastq.gz 547.9 MB
EGAF00003471692 fastq.gz 587.5 MB
EGAF00003471693 fastq.gz 484.3 MB
EGAF00003471694 fastq.gz 494.1 MB
EGAF00003471695 fastq.gz 1.2 GB
EGAF00003471696 fastq.gz 1.3 GB
EGAF00003471697 fastq.gz 594.7 MB
EGAF00003471698 fastq.gz 586.9 MB
EGAF00003471699 fastq.gz 587.8 MB
EGAF00003471700 fastq.gz 595.5 MB
EGAF00003471701 fastq.gz 536.0 MB
EGAF00003471702 fastq.gz 553.7 MB
EGAF00003471703 fastq.gz 441.3 MB
EGAF00003471704 fastq.gz 464.0 MB
EGAF00003471705 fastq.gz 859.8 MB
EGAF00003471706 fastq.gz 879.9 MB
EGAF00003471707 fastq.gz 598.6 MB
EGAF00003471708 fastq.gz 622.1 MB
EGAF00003471709 fastq.gz 795.4 MB
EGAF00003471710 fastq.gz 782.3 MB
EGAF00003471711 fastq.gz 983.8 MB
EGAF00003471712 fastq.gz 1.0 GB
EGAF00003471713 fastq.gz 919.4 MB
EGAF00003471714 fastq.gz 995.0 MB
EGAF00003471715 fastq.gz 750.4 MB
EGAF00003471716 fastq.gz 753.3 MB
EGAF00003471717 fastq.gz 694.2 MB
EGAF00003471718 fastq.gz 710.4 MB
EGAF00003471719 fastq.gz 950.0 MB
EGAF00003471720 fastq.gz 977.5 MB
EGAF00003471721 fastq.gz 1.0 GB
EGAF00003471722 fastq.gz 1.1 GB
EGAF00003471723 fastq.gz 809.5 MB
EGAF00003471724 fastq.gz 825.8 MB
EGAF00003471725 fastq.gz 839.5 MB
EGAF00003471726 fastq.gz 850.4 MB
EGAF00003471727 fastq.gz 881.7 MB
EGAF00003471728 fastq.gz 927.3 MB
EGAF00003471729 fastq.gz 874.9 MB
EGAF00003471730 fastq.gz 924.2 MB
EGAF00003471731 fastq.gz 762.3 MB
EGAF00003471732 fastq.gz 783.2 MB
EGAF00003471733 fastq.gz 988.2 MB
EGAF00003471734 fastq.gz 1.0 GB
EGAF00003471735 fastq.gz 970.2 MB
EGAF00003471736 fastq.gz 992.4 MB
EGAF00003471737 fastq.gz 663.7 MB
EGAF00003471738 fastq.gz 684.0 MB
EGAF00003471739 fastq.gz 699.3 MB
EGAF00003471740 fastq.gz 737.3 MB
EGAF00003471741 fastq.gz 620.1 MB
EGAF00003471742 fastq.gz 656.0 MB
90 Files (68.7 GB)