About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Single cell characterization of arrested B-lymphoid differentiation and leukemic cell states in ETV6-RUNX1-positive pediatric leukemia

Leukemic bone marrow in primary ETV6-RUNX1 positive acute lymphoblastic leukemia samples (Six diagnostic and two 15 days after treatment) using Chromium 3' single cell RNA-seq. Samples sequenced on 1-3 lanes and raw fastq files provided for each sample.

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Two PIs (Tampere/Kuopio) and a legal representative of the Tampere University Hospital

Data will be shared if the proposed project falls within the patient/caretaker consent

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001004374 RNASeq

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00003600023 fastq.gz 1.8 GB Report
EGAF00003600024 fastq.gz 6.6 GB Report
EGAF00003600025 fastq.gz 6.8 GB Report
EGAF00003600026 fastq.gz 23.5 GB Report
EGAF00003600027 fastq.gz 1.9 GB Report
EGAF00003600028 fastq.gz 6.7 GB Report
EGAF00003600029 fastq.gz 1.9 GB Report
EGAF00003600030 fastq.gz 6.9 GB Report
EGAF00003600031 fastq.gz 1.7 GB Report
EGAF00003600032 fastq.gz 5.9 GB Report
EGAF00003600033 fastq.gz 1.8 GB Report
EGAF00003600034 fastq.gz 6.5 GB Report
EGAF00003600035 fastq.gz 5.7 GB Report
EGAF00003600036 fastq.gz 19.3 GB Report
EGAF00003600037 fastq.gz 1.9 GB Report
EGAF00003600038 fastq.gz 6.9 GB Report
EGAF00003600039 fastq.gz 3.5 GB Report
EGAF00003600040 fastq.gz 10.3 GB Report
EGAF00003600041 fastq.gz 1.6 GB Report
EGAF00003600042 fastq.gz 5.7 GB Report
EGAF00003600043 fastq.gz 6.4 GB Report
EGAF00003600044 fastq.gz 20.8 GB Report
EGAF00003600045 fastq.gz 1.9 GB Report
EGAF00003600046 fastq.gz 6.7 GB Report
EGAF00003600047 fastq.gz 1.9 GB Report
EGAF00003600048 fastq.gz 6.7 GB Report
EGAF00003600049 fastq.gz 3.4 GB Report
EGAF00003600050 fastq.gz 10.0 GB Report
EGAF00003600051 fastq.gz 1.9 GB Report
EGAF00003600052 fastq.gz 6.8 GB Report
EGAF00003600053 fastq.gz 1.7 GB Report
EGAF00003600054 fastq.gz 5.8 GB Report
EGAF00003600055 fastq.gz 5.8 GB Report
EGAF00003600056 fastq.gz 19.9 GB Report
EGAF00003600057 fastq.gz 2.0 GB Report
EGAF00003600058 fastq.gz 7.1 GB Report
36 Files (235.5 GB)