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RNAseq and genotypes from pancreatic islets (InsPIRE study).

This is the data from the eQTLs InsPIRE study. This dataset includes RNAseq and genotypes from pancreatic islets and FAC sorted beta-cells, as well as RPKM values, covariates and cell count estimates.

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Data access policy for the InsPIRE_DAC

InsPIRE_DAC policy: 1. The User Institution agrees to only use these Data for the purpose of the Project (described in Appendix II) and only for Research Purposes. The User Institution further agrees that it will only use these Data for Research Purposes which are within the limitations (if any) set out in Appendix I. 2. The User Institution agrees to preserve, at all times, the confidentiality of these Data. In particular, it undertakes not to use, or attempt to use these Data to compromise or otherwise infringe the confidentiality of information on Research Participants. Without prejudice to the generality of the foregoing, the User Institution agrees to use at least the measures set out in Appendix I to protect these Data. 3. The User Institution agrees to protect the confidentiality of Research Participants in any research papers or publications that they prepare by taking all reasonable care to limit the possibility of identification. 4. The User Institution agrees not to link or combine these Data to other information or archived data available in a way that could re-identify the Research Participants, even if access to that data has been formally granted to the User Institution or is freely available without restriction. 5. The User Institution agrees only to transfer or disclose these Data, in whole or part, or any material derived from these Data, to the Authorised Personnel. Should the User Institution wish to share these Data with an External Collaborator, the External Collaborator must complete a separate application for access to these Data. 6. The User Institution agrees that the Data Producers, and all other parties involved in the creation, funding or protection of these Data: a) make no warranty or representation, express or implied as to the accuracy, quality or comprehensiveness of these Data; b) exclude to the fullest extent permitted by law all liability for actions, claims, proceedings, demands, losses (including but not limited to loss of profit), costs, awards damages and payments made by the Recipient that may arise (whether directly or indirectly) in any way whatsoever from the Recipient’s use of these Data or from the unavailability of, or break in access to, these Data for whatever reason and; c) bear no responsibility for the further analysis or interpretation of these Data. 7. The User Institution agrees to follow the Fort Lauderdale Guidelines (http://www.wellcome.ac.uk/stellent/groups/corporatesite/@policy_communications/documents/web_document/wtd003207.pdf ) and the Toronto Statement (http://www.nature.com/nature/journal/v461/n7261/full/461168a.html). This includes but is not limited to recognising the contribution of the Data Producers and including a proper acknowledgement in all reports or publications resulting from the use of these Data. 8. The User Institution agrees to follow the Publication Policy in Appendix III. This includes respecting the moratorium period for the Data Producers to publish the first peer-reviewed report describing and analysing these Data. 9. The User Institution agrees not to make intellectual property claims on these Data and not to use intellectual property protection in ways that would prevent or block access to, or use of, any element of these Data, or conclusion drawn directly from these Data. 10. The User Institution can elect to perform further research that would add intellectual and resource capital to these data and decide to obtain intellectual property rights on these downstream discoveries. In this case, the User Institution agrees to implement licensing policies that will not obstruct further research and to follow the U.S. National Institutes of Health Best Practices for the Licensing of Genomic Inventions (2005) (https://www.icgc.org/files/daco/NIH_BestPracticesLicensingGenomicInventions_2005_en.pdf ) in conformity with the Organisation for Economic Co-operation and Development Guidelines for the Licensing of the Genetic Inventions (2006) (http://www.oecd.org/science/biotech/36198812.pdf ). 11. The User Institution agrees to destroy/discard the Data held, once it is no longer used for the Project, unless obliged to retain the data for archival purposes in conformity with audit or legal requirements. 12. The User Institution will notify members of the InsPIRE steering committee (acting on behalf of InsPIRE collaborators) within 30 days of any changes or departures of Authorised Personnel. 13. The User Institution will notify InsPIRE steering committee (acting on behalf of InsPIRE collaborators) prior to any significant changes to the protocol for the Project. 14. The User Institution will notify InsPIRE steering committee (acting on behalf of InsPIRE collaborators) as soon as it becomes aware of a breach of the terms or conditions of this agreement. 15. InsPIRE steering committee may terminate this agreement by written notice to the User Institution. If this agreement terminates for any reason, the User Institution will be required to destroy any Data held, including copies and backup copies. This clause does not prevent the User Institution from retaining these data for archival purpose in conformity with audit or legal requirements. 16. The User Institution accepts that it may be necessary for the Data Producers to alter the terms of this agreement from time to time. In the event that changes are required, the Data Producers or their appointed agent will contact the User Institution to inform it of the changes and the User Institution may elect to accept the changes or terminate the agreement. 17. If requested, the User Institution will allow data security and management documentation to be inspected to verify that it is complying with the terms of this agreement. 18. The User Institution agrees to distribute a copy of these terms to the Authorised Personnel. The User Institution will procure that the Authorised Personnel comply with the terms of this agreement.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001003997 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00003940321 bam 4.8 GB
EGAF00003940322 bam 4.0 GB
EGAF00003940323 bam 919.3 MB
EGAF00003940324 bam 1.3 GB
EGAF00003940325 bam 4.9 GB
EGAF00003940326 bam 5.0 GB
EGAF00003940327 bam 3.6 GB
EGAF00003940328 bam 76.6 MB
EGAF00003940329 bam 6.9 GB
EGAF00003940330 bam 4.7 GB
EGAF00003940331 bam 2.9 GB
EGAF00003940332 bam 2.1 GB
EGAF00003940333 bam 3.6 GB
EGAF00003940334 bam 3.1 GB
EGAF00003940335 bam 4.3 GB
EGAF00003940336 bam 5.1 GB
EGAF00003940337 bam 10.6 GB
EGAF00003940338 bam 9.9 GB
EGAF00003940339 bam 11.6 GB
EGAF00003940340 bam 10.2 GB
EGAF00003940341 bam 11.3 GB
EGAF00003940342 bam 12.2 GB
EGAF00003940343 bam 9.4 GB
EGAF00003940344 bam 11.0 GB
EGAF00003940345 bam 9.2 GB
EGAF00003940346 bam 10.0 GB
EGAF00003940347 bam 10.8 GB
EGAF00003940348 bam 9.0 GB
EGAF00003940349 bam 10.4 GB
EGAF00003940350 bam 9.9 GB
EGAF00003940351 bam 10.2 GB
EGAF00003940352 bam 8.6 GB
EGAF00003940353 bam 9.0 GB
EGAF00003940354 bam 10.2 GB
EGAF00003940355 bam 9.2 GB
EGAF00003940356 bam 10.1 GB
EGAF00003940357 bam 11.5 GB
EGAF00003940358 bam 10.3 GB
EGAF00003940359 bam 11.1 GB
EGAF00003940360 bam 10.9 GB
EGAF00003940361 bam 9.7 GB
EGAF00003940362 bam 8.6 GB
EGAF00003940363 bam 5.2 GB
EGAF00003940364 bam 10.6 GB
EGAF00003940365 bam 8.8 GB
EGAF00003940366 bam 10.1 GB
EGAF00003940367 bam 10.3 GB
EGAF00003940368 bam 10.8 GB
EGAF00003940369 bam 12.0 GB
EGAF00003940370 bam 11.2 GB
EGAF00003940371 bam 11.9 GB
EGAF00003940372 bam 7.6 GB
EGAF00003940373 bam 10.7 GB
EGAF00003940374 bam 8.9 GB
EGAF00003940375 bam 7.0 GB
EGAF00003940376 bam 9.5 GB
EGAF00003940377 bam 7.3 GB
EGAF00003940378 bam 7.7 GB
EGAF00003940379 bam 10.0 GB
EGAF00003940380 bam 10.7 GB
EGAF00003940381 bam 9.1 GB
EGAF00003940382 bam 10.3 GB
EGAF00003940383 bam 10.7 GB
EGAF00003940384 bam 10.0 GB
EGAF00003940385 bam 10.1 GB
EGAF00003940386 bam 10.2 GB
EGAF00003940387 bam 12.6 GB
EGAF00003940388 bam 11.4 GB
EGAF00003940389 bam 10.1 GB
EGAF00003940390 bam 9.2 GB
EGAF00003940391 bam 9.9 GB
EGAF00003940392 bam 9.6 GB
EGAF00003940393 bam 10.6 GB
EGAF00003940394 bam 13.9 GB
EGAF00003940395 bam 9.1 GB
EGAF00003940396 bam 11.5 GB
EGAF00003940397 bam 10.9 GB
EGAF00003940398 bam 13.5 GB
EGAF00003940399 bam 11.5 GB
EGAF00003940400 bam 10.4 GB
EGAF00003940401 bam 10.2 GB
EGAF00003940402 bam 7.6 GB
EGAF00003940403 bam 10.3 GB
EGAF00003940404 bam 9.5 GB
EGAF00003940405 bam 8.1 GB
EGAF00003940406 bam 6.6 GB
EGAF00003940407 bam 13.2 GB
EGAF00003940408 bam 8.6 GB
EGAF00003940409 bam 11.1 GB
EGAF00003940410 bam 10.8 GB
EGAF00003940411 bam 8.8 GB
EGAF00003940412 bam 10.3 GB
EGAF00003940413 bam 11.5 GB
EGAF00003940414 bam 8.4 GB
EGAF00003940415 bam 7.6 GB
EGAF00003940416 bam 7.8 GB
EGAF00003940417 bam 7.2 GB
EGAF00003940418 bam 7.9 GB
EGAF00003940419 bam 10.4 GB
EGAF00003940420 bam 9.2 GB
EGAF00003940421 bam 7.9 GB
EGAF00003940422 bam 8.7 GB
EGAF00003940423 bam 9.7 GB
EGAF00003940424 bam 11.2 GB
EGAF00003940425 bam 10.2 GB
EGAF00003940426 bam 10.6 GB
EGAF00003940427 bam 9.5 GB
EGAF00003940428 bam 8.3 GB
EGAF00003940429 bam 10.2 GB
EGAF00003940430 bam 8.9 GB
EGAF00003940431 bam 10.2 GB
EGAF00003940432 bam 8.9 GB
EGAF00003940433 bam 10.0 GB
EGAF00003940434 bam 10.9 GB
EGAF00003940435 bam 9.0 GB
EGAF00003940436 bam 10.2 GB
EGAF00003940437 bam 9.8 GB
EGAF00003940438 bam 9.2 GB
EGAF00003940439 bam 9.9 GB
EGAF00003940440 bam 8.2 GB
EGAF00003940441 bam 9.7 GB
EGAF00003940442 bam 4.4 GB
EGAF00003940443 bam 9.9 GB
EGAF00003940444 bam 14.7 GB
EGAF00003940445 bam 9.1 GB
EGAF00003940446 bam 7.7 GB
EGAF00003940447 bam 18.3 GB
EGAF00003940448 bam 7.8 GB
EGAF00003940449 bam 4.3 GB
EGAF00003940450 bam 17.6 GB
EGAF00003940451 bam 6.5 GB
EGAF00003940452 bam 6.9 GB
EGAF00003940453 bam 6.4 GB
EGAF00003940454 bam 7.0 GB
EGAF00003940455 bam 6.7 GB
EGAF00003940456 bam 6.0 GB
EGAF00003940457 bam 7.0 GB
EGAF00003940458 bam 6.3 GB
EGAF00003940459 bam 7.1 GB
EGAF00003940460 bam 7.0 GB
EGAF00003940461 bam 7.5 GB
EGAF00003940462 bam 14.7 GB
EGAF00003940463 bam 8.2 GB
EGAF00003940464 bam 7.5 GB
EGAF00003940465 bam 6.7 GB
EGAF00003940466 bam 7.0 GB
EGAF00003940467 bam 6.3 GB
EGAF00003940468 bam 6.9 GB
EGAF00003940469 bam 11.0 GB
EGAF00003940470 bam 7.4 GB
EGAF00003940471 bam 10.3 GB
EGAF00003940472 bam 9.4 GB
EGAF00003940473 bam 9.7 GB
EGAF00003940474 bam 10.2 GB
EGAF00003940475 bam 10.9 GB
EGAF00003940476 bam 9.6 GB
EGAF00003940477 bam 9.0 GB
EGAF00003940478 bam 8.7 GB
EGAF00003940479 bam 4.8 GB
EGAF00003940480 bam 4.6 GB
EGAF00003940481 bam 9.4 GB
EGAF00003940482 bam 9.8 GB
EGAF00003940483 bam 9.5 GB
EGAF00003940484 bam 9.3 GB
EGAF00003940485 bam 10.4 GB
EGAF00003940486 bam 10.6 GB
EGAF00003940487 bam 9.8 GB
EGAF00003940488 bam 7.9 GB
EGAF00003940489 bam 7.6 GB
EGAF00003940490 bam 10.4 GB
EGAF00003940491 bam 8.6 GB
EGAF00003940492 bam 10.6 GB
EGAF00003940493 bam 9.2 GB
EGAF00003940494 bam 8.0 GB
EGAF00003940495 bam 10.3 GB
EGAF00003940496 bam 8.8 GB
EGAF00003940497 bam 8.7 GB
EGAF00003940498 bam 9.0 GB
EGAF00003940499 bam 8.9 GB
EGAF00003940500 bam 9.6 GB
EGAF00003940501 bam 7.8 GB
EGAF00003940502 bam 9.8 GB
EGAF00003940503 bam 6.8 GB
EGAF00003940504 bam 10.4 GB
EGAF00003940505 bam 7.9 GB
EGAF00003940506 bam 9.5 GB
EGAF00003940507 bam 9.5 GB
EGAF00003940508 bam 9.7 GB
EGAF00003940509 bam 9.0 GB
EGAF00003940510 bam 10.2 GB
EGAF00003940511 bam 17.1 GB
EGAF00003940512 bam 15.6 GB
EGAF00003940513 bam 29.1 GB
EGAF00003940514 bam 22.1 GB
EGAF00003940515 bam 16.8 GB
EGAF00003940516 bam 18.3 GB
EGAF00003940517 bam 18.4 GB
EGAF00003940518 bam 18.0 GB
EGAF00003940519 bam 17.7 GB
EGAF00003940520 bam 18.5 GB
EGAF00003940521 bam 19.7 GB
EGAF00003940522 bam 16.8 GB
EGAF00003940523 bam 20.7 GB
EGAF00003940524 bam 19.9 GB
EGAF00003940525 bam 17.9 GB
EGAF00003940526 bam 21.6 GB
EGAF00003940527 bam 18.2 GB
EGAF00003940528 bam 19.3 GB
EGAF00003940529 bam 15.3 GB
EGAF00003940530 bam 18.4 GB
EGAF00003940531 bam 19.2 GB
EGAF00003940532 bam 18.6 GB
EGAF00003940533 bam 20.4 GB
EGAF00003940534 bam 26.5 GB
EGAF00003940535 bam 18.0 GB
EGAF00003940536 bam 24.1 GB
EGAF00003940537 bam 20.1 GB
EGAF00003940538 bam 19.0 GB
EGAF00003940539 bam 18.0 GB
EGAF00003940540 bam 18.0 GB
EGAF00003940541 bam 20.6 GB
EGAF00003940542 bam 21.4 GB
EGAF00003940543 bam 19.8 GB
EGAF00003940544 bam 16.8 GB
EGAF00003940545 bam 21.0 GB
EGAF00003940546 bam 17.4 GB
EGAF00003940547 bam 19.5 GB
EGAF00003940548 bam 16.9 GB
EGAF00003940549 bam 18.1 GB
EGAF00003940550 bam 4.6 GB
EGAF00003940551 bam 5.2 GB
EGAF00003940552 bam 1.0 GB
EGAF00003940553 bam 1.7 GB
EGAF00003940554 bam 4.2 GB
EGAF00003940555 bam 4.9 GB
EGAF00003940556 bam 4.7 GB
EGAF00003940557 bam 4.9 GB
EGAF00003940558 bam 3.1 GB
EGAF00003940559 bam 3.6 GB
EGAF00003940560 bam 4.9 GB
EGAF00003940561 bam 5.3 GB
EGAF00003940562 bam 4.0 GB
EGAF00003940563 bam 3.7 GB
EGAF00003940564 bam 5.7 GB
EGAF00003940565 bam 4.4 GB
EGAF00003940566 bam 4.9 GB
EGAF00003940567 bam 4.5 GB
EGAF00003940568 bam 4.6 GB
EGAF00003940569 bam 4.9 GB
EGAF00003940570 bam 2.8 GB
EGAF00003940571 bam 3.5 GB
EGAF00003940572 bam 3.5 GB
EGAF00003940573 bam 4.2 GB
EGAF00003940574 bam 3.7 GB
EGAF00003940575 bam 4.5 GB
EGAF00003940758 vcf.gz 1.5 GB
EGAF00003940759 csv 629.5 kB
EGAF00003940760 raw.gz 12.4 MB
258 Files (2.6 TB)