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Single-cell RNA sequencing of acute myeloid leukemia patients

Single-cell RNA sequencing was performed on bone marrow mononuclear cells from 8 acute myeloid leukemia patients at diagnosis. The profiling was performed using 10x Genomics 3' (5 samples) and 5' (3 samples) platforms. The raw data are available as fastq files.

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HRUH data access policy

The proposed research use must be in agreement with the specific data use limitation for this study. Data use requests will be evaluated based on the Helsinki University Hospital ethics committee permit concerning the samples.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001004444 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00003946413 fastq.gz 515.2 MB
EGAF00003946414 fastq.gz 524.9 MB
EGAF00003946415 fastq.gz 384.1 MB
EGAF00003946416 fastq.gz 389.3 MB
EGAF00003946417 fastq.gz 560.1 MB
EGAF00003946418 fastq.gz 566.6 MB
EGAF00003946419 fastq.gz 235.4 MB
EGAF00003946420 fastq.gz 238.3 MB
EGAF00003946421 fastq.gz 325.1 MB
EGAF00003946422 fastq.gz 327.7 MB
EGAF00003946423 fastq.gz 238.5 MB
EGAF00003946424 fastq.gz 242.1 MB
EGAF00003946425 fastq.gz 278.4 MB
EGAF00003946426 fastq.gz 283.4 MB
EGAF00003946427 fastq.gz 79.1 MB
EGAF00003946428 fastq.gz 80.1 MB
EGAF00003946429 fastq.gz 472.1 MB
EGAF00003946430 fastq.gz 478.2 MB
EGAF00003946431 fastq.gz 292.3 MB
EGAF00003946432 fastq.gz 295.1 MB
EGAF00003946433 fastq.gz 345.6 MB
EGAF00003946434 fastq.gz 351.0 MB
EGAF00003946435 fastq.gz 311.5 MB
EGAF00003946436 fastq.gz 316.1 MB
EGAF00003946437 fastq.gz 346.4 MB
EGAF00003946438 fastq.gz 351.4 MB
EGAF00003946439 fastq.gz 331.1 MB
EGAF00003946440 fastq.gz 335.2 MB
EGAF00003946441 fastq.gz 530.4 MB
EGAF00003946442 fastq.gz 537.3 MB
EGAF00003946443 fastq.gz 333.2 MB
EGAF00003946444 fastq.gz 337.9 MB
EGAF00003946445 fastq.gz 196.0 MB
EGAF00003946446 fastq.gz 198.1 MB
EGAF00003946447 fastq.gz 229.1 MB
EGAF00003946448 fastq.gz 230.2 MB
EGAF00003946449 fastq.gz 156.8 MB
EGAF00003946450 fastq.gz 157.7 MB
EGAF00003946451 fastq.gz 208.7 MB
EGAF00003946452 fastq.gz 209.9 MB
EGAF00003946453 fastq.gz 146.8 MB
EGAF00003946454 fastq.gz 148.0 MB
EGAF00003946455 fastq.gz 295.8 MB
EGAF00003946456 fastq.gz 297.1 MB
EGAF00003946457 fastq.gz 186.6 MB
EGAF00003946458 fastq.gz 187.8 MB
EGAF00003946459 fastq.gz 68.9 MB
EGAF00003946460 fastq.gz 69.2 MB
EGAF00003946461 fastq.gz 123.9 MB
EGAF00003946462 fastq.gz 124.6 MB
EGAF00003946463 fastq.gz 146.1 MB
EGAF00003946464 fastq.gz 147.0 MB
EGAF00003946465 fastq.gz 147.2 MB
EGAF00003946466 fastq.gz 147.9 MB
EGAF00003946467 fastq.gz 120.0 MB
EGAF00003946468 fastq.gz 120.8 MB
EGAF00003946469 fastq.gz 267.7 MB
EGAF00003946470 fastq.gz 276.7 MB
EGAF00003946471 fastq.gz 214.2 MB
EGAF00003946472 fastq.gz 219.7 MB
EGAF00003946473 fastq.gz 238.2 MB
EGAF00003946474 fastq.gz 245.8 MB
EGAF00003946475 fastq.gz 211.9 MB
EGAF00003946476 fastq.gz 216.8 MB
EGAF00003946477 fastq.gz 1.4 GB
EGAF00003946478 fastq.gz 3.5 GB
EGAF00003946479 fastq.gz 1.4 GB
EGAF00003946480 fastq.gz 3.6 GB
EGAF00003946481 fastq.gz 1.1 GB
EGAF00003946482 fastq.gz 2.8 GB
EGAF00003946483 fastq.gz 1.1 GB
EGAF00003946484 fastq.gz 2.8 GB
EGAF00003946485 fastq.gz 1.7 GB
EGAF00003946486 fastq.gz 4.4 GB
EGAF00003946487 fastq.gz 1.8 GB
EGAF00003946488 fastq.gz 4.5 GB
EGAF00003946489 fastq.gz 624.7 MB
EGAF00003946490 fastq.gz 1.6 GB
EGAF00003946491 fastq.gz 636.0 MB
EGAF00003946492 fastq.gz 1.6 GB
EGAF00003946493 fastq.gz 1.0 GB
EGAF00003946494 fastq.gz 2.6 GB
EGAF00003946495 fastq.gz 1.1 GB
EGAF00003946496 fastq.gz 2.6 GB
EGAF00003946497 fastq.gz 624.7 MB
EGAF00003946498 fastq.gz 1.6 GB
EGAF00003946499 fastq.gz 635.1 MB
EGAF00003946500 fastq.gz 1.6 GB
EGAF00003946501 fastq.gz 817.9 MB
EGAF00003946502 fastq.gz 2.0 GB
EGAF00003946503 fastq.gz 832.7 MB
EGAF00003946504 fastq.gz 2.1 GB
EGAF00003946505 fastq.gz 218.8 MB
EGAF00003946506 fastq.gz 545.6 MB
EGAF00003946507 fastq.gz 223.1 MB
EGAF00003946508 fastq.gz 554.9 MB
EGAF00003946509 fastq.gz 1.4 GB
EGAF00003946510 fastq.gz 3.5 GB
EGAF00003946511 fastq.gz 1.4 GB
EGAF00003946512 fastq.gz 3.5 GB
EGAF00003946513 fastq.gz 879.2 MB
EGAF00003946514 fastq.gz 2.2 GB
EGAF00003946515 fastq.gz 894.7 MB
EGAF00003946516 fastq.gz 2.3 GB
EGAF00003946517 fastq.gz 1.1 GB
EGAF00003946518 fastq.gz 2.8 GB
EGAF00003946519 fastq.gz 1.1 GB
EGAF00003946520 fastq.gz 2.9 GB
EGAF00003946521 fastq.gz 815.2 MB
EGAF00003946522 fastq.gz 2.0 GB
EGAF00003946523 fastq.gz 829.5 MB
EGAF00003946524 fastq.gz 2.1 GB
EGAF00003946525 fastq.gz 992.0 MB
EGAF00003946526 fastq.gz 3.0 GB
EGAF00003946527 fastq.gz 1.0 GB
EGAF00003946528 fastq.gz 3.0 GB
EGAF00003946529 fastq.gz 931.0 MB
EGAF00003946530 fastq.gz 2.8 GB
EGAF00003946531 fastq.gz 942.8 MB
EGAF00003946532 fastq.gz 2.9 GB
EGAF00003946533 fastq.gz 1.6 GB
EGAF00003946534 fastq.gz 4.7 GB
EGAF00003946535 fastq.gz 1.6 GB
EGAF00003946536 fastq.gz 4.7 GB
EGAF00003946537 fastq.gz 972.9 MB
EGAF00003946538 fastq.gz 2.9 GB
EGAF00003946539 fastq.gz 985.7 MB
EGAF00003946540 fastq.gz 3.0 GB
EGAF00003946541 fastq.gz 541.8 MB
EGAF00003946542 fastq.gz 1.6 GB
EGAF00003946543 fastq.gz 543.4 MB
EGAF00003946544 fastq.gz 1.6 GB
EGAF00003946545 fastq.gz 676.6 MB
EGAF00003946546 fastq.gz 2.0 GB
EGAF00003946547 fastq.gz 679.0 MB
EGAF00003946548 fastq.gz 2.0 GB
EGAF00003946549 fastq.gz 447.8 MB
EGAF00003946550 fastq.gz 1.3 GB
EGAF00003946551 fastq.gz 449.2 MB
EGAF00003946552 fastq.gz 1.3 GB
EGAF00003946553 fastq.gz 598.3 MB
EGAF00003946554 fastq.gz 1.8 GB
EGAF00003946555 fastq.gz 600.9 MB
EGAF00003946556 fastq.gz 1.8 GB
EGAF00003946557 fastq.gz 417.5 MB
EGAF00003946558 fastq.gz 1.3 GB
EGAF00003946559 fastq.gz 418.8 MB
EGAF00003946560 fastq.gz 1.3 GB
EGAF00003946561 fastq.gz 874.2 MB
EGAF00003946562 fastq.gz 2.7 GB
EGAF00003946563 fastq.gz 876.2 MB
EGAF00003946564 fastq.gz 2.7 GB
EGAF00003946565 fastq.gz 532.8 MB
EGAF00003946566 fastq.gz 1.6 GB
EGAF00003946567 fastq.gz 534.4 MB
EGAF00003946568 fastq.gz 1.6 GB
EGAF00003946569 fastq.gz 188.0 MB
EGAF00003946570 fastq.gz 571.8 MB
EGAF00003946571 fastq.gz 188.7 MB
EGAF00003946572 fastq.gz 574.3 MB
EGAF00003946573 fastq.gz 361.1 MB
EGAF00003946574 fastq.gz 1.1 GB
EGAF00003946575 fastq.gz 362.4 MB
EGAF00003946576 fastq.gz 1.1 GB
EGAF00003946577 fastq.gz 416.7 MB
EGAF00003946578 fastq.gz 1.3 GB
EGAF00003946579 fastq.gz 418.3 MB
EGAF00003946580 fastq.gz 1.3 GB
EGAF00003946581 fastq.gz 416.9 MB
EGAF00003946582 fastq.gz 1.3 GB
EGAF00003946583 fastq.gz 418.4 MB
EGAF00003946584 fastq.gz 1.3 GB
EGAF00003946585 fastq.gz 337.3 MB
EGAF00003946586 fastq.gz 1.0 GB
EGAF00003946587 fastq.gz 339.3 MB
EGAF00003946588 fastq.gz 1.0 GB
EGAF00003946589 fastq.gz 783.2 MB
EGAF00003946590 fastq.gz 2.3 GB
EGAF00003946591 fastq.gz 811.3 MB
EGAF00003946592 fastq.gz 2.4 GB
EGAF00003946593 fastq.gz 609.9 MB
EGAF00003946594 fastq.gz 1.8 GB
EGAF00003946595 fastq.gz 626.3 MB
EGAF00003946596 fastq.gz 1.8 GB
EGAF00003946597 fastq.gz 689.6 MB
EGAF00003946598 fastq.gz 2.0 GB
EGAF00003946599 fastq.gz 712.6 MB
EGAF00003946600 fastq.gz 2.0 GB
EGAF00003946601 fastq.gz 596.7 MB
EGAF00003946602 fastq.gz 1.7 GB
EGAF00003946603 fastq.gz 611.9 MB
EGAF00003946604 fastq.gz 1.8 GB
192 Files (204.5 GB)