Dataset

RNA-seq data from 121 tumor samples with muscle invasive bladder cancer.

Dataset ID Technology Samples
EGAD00001006238 NextSeq 500 121

Dataset Description

In this study, a total of 300 patients with MIBC receiving chemotherapy were included; 62 received NAC before cystectomy and 245 received first-line chemotherapy upon detection of locally-advanced (T4b) or metastatic disease. Treatment response, defined as pathological downstaging (< pTa,CIS,N0) after NAC or complete or partial response after first-line treatment (RECIST criteria). RNA-seq was performed using the QuantSeq kit FWD HT kit (Lexogen) using 500 ng input RNA from 121 tumor samples. Data provided here consist of 780 fastq files for RNA-seq.

Who controls access to this dataset

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact:

MOMA - Bladder group DAC
Contact person: Lars Dyrskj√łt
Email: lars [at] clin [dot] au [dot] dk
More details: EGAC00001001642

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