Need Help?

NABUCCO cohort 1 (NCT03387761) - Neo-Adjuvant Bladder Urothelial Carcinoma COmbination-immunotherapy

NABUCCO cohort 1 sequencing data. The dataset includes: * Whole exome DNAseq pre-treatment on tumor samples (n=24) matched with blood samples (n=24) * RNAseq pre-treatment on tumor samples (n=18) * RNAseq post-treatment on tumor samples (n=18). Not all pre-treatment samples are linked with pre-treatment samples * High coverage Whole exome DNAseq on pre-treatment tumor samples (n=3) matched with post-treatment metastasized lymph nodes isolated with laser microdissection (n=3) * All samples are labelled with the response phenotype (Complete Responder or Non-Complete Responder)

Request Access

NKI data access policy

Data will be made available from the corresponding author on reasonable request for academic use and within the limitations of the provided informed consent by the corresponding author upon acceptance. Every request will be reviewed by the institutional review board of the NKI; the researcher will need to sign a data access agreement with the NKI after approval

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001004521 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00004168939 bam 956.0 MB
EGAF00004168940 bam 1.2 GB
EGAF00004168941 bam 556.7 MB
EGAF00004168942 bam 1.3 GB
EGAF00004168943 bam 845.7 MB
EGAF00004168944 bam 1.5 GB
EGAF00004168945 bam 1.7 GB
EGAF00004168946 bam 1.2 GB
EGAF00004168947 bam 1.2 GB
EGAF00004168948 bam 1.2 GB
EGAF00004168949 bam 654.1 MB
EGAF00004168950 bam 1.2 GB
EGAF00004168951 bam 1.1 GB
EGAF00004168952 bam 979.9 MB
EGAF00004168953 bam 1.4 GB
EGAF00004168954 bam 430.3 MB
EGAF00004168955 bam 400.8 MB
EGAF00004168956 bam 872.9 MB
EGAF00004168957 bam 784.0 MB
EGAF00004168958 bam 796.4 MB
EGAF00004168959 bam 1.2 GB
EGAF00004168960 bam 1.4 GB
EGAF00004168961 bam 1.1 GB
EGAF00004168962 bam 978.1 MB
EGAF00004168963 bam 1.6 GB
EGAF00004168964 bam 946.6 MB
EGAF00004168965 bam 897.4 MB
EGAF00004168966 bam 880.4 MB
EGAF00004168967 bam 1.3 GB
EGAF00004168968 bam 1.2 GB
EGAF00004168969 bam 1.2 GB
EGAF00004168970 bam 738.9 MB
EGAF00004168971 bam 664.8 MB
EGAF00004168972 bam 5.1 GB
EGAF00004168973 bam 578.6 MB
EGAF00004168974 bam 955.4 MB
EGAF00004168975 bam 6.9 GB
EGAF00004168976 bam 7.9 GB
EGAF00004168977 bam 8.5 GB
EGAF00004168978 bam 6.9 GB
EGAF00004168979 bam 9.3 GB
EGAF00004168980 bam 6.2 GB
EGAF00004168981 bam 8.7 GB
EGAF00004168982 bam 5.0 GB
EGAF00004168983 bam 6.5 GB
EGAF00004168984 bam 4.7 GB
EGAF00004168985 bam 6.6 GB
EGAF00004168986 bam 9.3 GB
EGAF00004168987 bam 6.5 GB
EGAF00004168988 bam 8.2 GB
EGAF00004168989 bam 9.4 GB
EGAF00004168990 bam 7.3 GB
EGAF00004168991 bam 8.0 GB
EGAF00004168992 bam 8.5 GB
EGAF00004168993 bam 7.0 GB
EGAF00004168994 bam 8.0 GB
EGAF00004168995 bam 6.6 GB
EGAF00004168996 bam 6.8 GB
EGAF00004168997 bam 6.2 GB
EGAF00004168998 bam 6.6 GB
EGAF00004168999 bam 6.5 GB
EGAF00004169000 bam 7.0 GB
EGAF00004169001 bam 6.6 GB
EGAF00004169002 bam 7.9 GB
EGAF00004169003 bam 8.4 GB
EGAF00004169004 bam 9.1 GB
EGAF00004169005 bam 8.1 GB
EGAF00004169006 bam 6.5 GB
EGAF00004169007 bam 8.3 GB
EGAF00004169008 bam 6.7 GB
EGAF00004169009 bam 8.0 GB
EGAF00004169010 bam 7.0 GB
EGAF00004169011 bam 7.1 GB
EGAF00004169012 bam 6.7 GB
EGAF00004169013 bam 5.3 GB
EGAF00004169014 bam 5.5 GB
EGAF00004169015 bam 5.4 GB
EGAF00004169016 bam 6.4 GB
EGAF00004169017 bam 5.8 GB
EGAF00004169018 bam 5.5 GB
EGAF00004169019 bam 6.8 GB
EGAF00004169020 bam 21.4 GB
EGAF00004169021 bam 37.8 GB
EGAF00004169022 bam 27.1 GB
EGAF00004169023 bam 31.2 GB
EGAF00004169024 bam 33.5 GB
EGAF00004169025 bam 35.0 GB
EGAF00004169026 bam 7.6 GB
EGAF00004169027 bam 5.4 GB
EGAF00004169028 bam 6.0 GB
90 Files (567.0 GB)