Sequencing data for oesophageal and related samples - Katz-Summercorn, Jammula et al (RNA)

Data supporting: “Multi-omic cross-sectional cohort study of pre-malignant Barrett’s esophagus reveals structural variation and retrotransposon activity occur early in cancer evolution.” Katz-Summercorn, Jammula et al. RNAseq (BAM files)

DAC: EGAC00001000010
Technology: Illumina HiSeq 2000

Access Policy1 Study Files

Metadata

Request Access

HMB DUO:0000006 (version: 2021-02-23)health or medical or biomedical researchThis data use permission indicates that use is allowed for health/medical/biomedical purposes; does not include the study of population origins or ancestry.
NPUNCU DUO:0000018 (version: 2021-02-23)not for profit, non commercial use onlyThis data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.
PS DUO:0000027 (version: 2021-02-23)project specific restrictionThis data use modifier indicates that use is limited to use within an approved project.
GRU DUO:0000042 (version: 2021-02-23)general research useThis data use permission indicates that use is allowed for general research use for any research purpose.

ICGC Data Access

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID	Study Title	Study Type
EGAS00001000726	ICGC Oesophageal adenocarcinoma - Barrett's samples	Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID	File Type	Size
EGAF00001809070	bam	2.9 GB
EGAF00001904373	bam	3.6 GB
EGAF00001904374	bam	3.6 GB
EGAF00001904375	bam	3.8 GB
EGAF00001904376	bam	4.1 GB
EGAF00001904377	bam	3.0 GB
EGAF00001904378	bam	4.6 GB
EGAF00001904379	bam	4.5 GB
EGAF00001904381	bam	4.7 GB
EGAF00001904382	bam	4.3 GB
EGAF00001904383	bam	4.2 GB
EGAF00001904384	bam	5.2 GB
EGAF00001904385	bam	4.4 GB
EGAF00001904386	bam	5.1 GB
EGAF00001904388	bam	3.3 GB
EGAF00001904389	bam	4.7 GB
EGAF00001904390	bam	3.9 GB
EGAF00001904391	bam	2.9 GB
EGAF00001904392	bam	4.5 GB
EGAF00001904393	bam	3.7 GB
EGAF00001904394	bam	4.8 GB
EGAF00001904395	bam	4.8 GB
EGAF00001904396	bam	5.0 GB
EGAF00001904397	bam	4.4 GB
EGAF00001904398	bam	4.3 GB
EGAF00001904399	bam	2.7 GB
EGAF00001904400	bam	3.6 GB
EGAF00001904401	bam	3.9 GB
EGAF00001904402	bam	3.6 GB
EGAF00001904403	bam	4.2 GB
EGAF00001904404	bam	3.1 GB
EGAF00001904405	bam	3.8 GB
EGAF00001904406	bam	3.1 GB
EGAF00001904407	bam	3.6 GB
EGAF00001904408	bam	4.7 GB
EGAF00001904412	bam	3.7 GB
EGAF00001904413	bam	4.7 GB
EGAF00001904414	bam	4.5 GB
EGAF00001904415	bam	4.4 GB
EGAF00001904416	bam	4.9 GB
EGAF00001904417	bam	3.1 GB
EGAF00001904418	bam	5.1 GB
EGAF00001904419	bam	3.5 GB
EGAF00001904420	bam	2.7 GB
EGAF00001904421	bam	4.0 GB
EGAF00001904422	bam	3.3 GB
EGAF00001904423	bam	3.5 GB
EGAF00001904424	bam	4.2 GB
EGAF00002559234	bam	3.9 GB
EGAF00002559235	bam	3.6 GB
EGAF00002559236	bam	4.0 GB
EGAF00002559237	bam	5.6 GB
EGAF00002559238	bam	5.0 GB
EGAF00002559239	bam	4.3 GB
EGAF00002559240	bam	2.2 GB
EGAF00002559241	bam	4.8 GB
EGAF00002559242	bam	4.6 GB
EGAF00002559243	bam	4.5 GB
EGAF00002559244	bam	2.9 GB
EGAF00002559245	bam	3.7 GB
EGAF00002559250	bam	4.4 GB
EGAF00002559251	bam	3.4 GB
EGAF00002559252	bam	3.0 GB
EGAF00002559253	bam	3.0 GB
EGAF00002559254	bam	3.0 GB
EGAF00002559255	bam	2.8 GB
EGAF00002559256	bam	3.3 GB
EGAF00002559257	bam	3.4 GB
EGAF00002559258	bam	5.6 GB
EGAF00002559259	bam	4.0 GB
EGAF00002559261	bam	10.2 GB
EGAF00002559262	bam	4.0 GB
EGAF00002559263	bam	3.5 GB
EGAF00002559264	bam	3.2 GB
EGAF00002559265	bam	2.9 GB
EGAF00002559266	bam	3.5 GB
EGAF00002559267	bam	4.6 GB
EGAF00002559268	bam	4.1 GB
EGAF00002559270	bam	4.4 GB
EGAF00002559271	bam	3.7 GB
EGAF00002559272	bam	3.8 GB
EGAF00002559273	bam	4.3 GB
EGAF00002559274	bam	5.2 GB
EGAF00002559275	bam	3.3 GB
EGAF00002559276	bam	4.7 GB
EGAF00002559277	bam	4.6 GB
EGAF00002559278	bam	4.3 GB
EGAF00002559279	bam	5.2 GB
EGAF00002559280	bam	4.2 GB
EGAF00002559281	bam	4.2 GB
EGAF00002559282	bam	973.1 MB
EGAF00002559283	bam	1.1 GB
EGAF00002559284	bam	18.4 GB
EGAF00002559285	bam	4.3 GB
EGAF00002559286	bam	5.2 GB
EGAF00002559287	bam	4.9 GB
EGAF00002559288	bam	5.2 GB
EGAF00002559289	bam	4.8 GB
EGAF00002559290	bam	5.3 GB
EGAF00002559291	bam	5.1 GB
EGAF00002559292	bam	4.3 GB
EGAF00002559293	bam	4.7 GB
EGAF00002559294	bam	1.3 GB
EGAF00002559295	bam	3.7 GB
EGAF00002559296	bam	3.8 GB
EGAF00002559329	bam	5.5 GB
EGAF00002559330	bam	3.6 GB
EGAF00002559332	bam	2.3 GB
EGAF00002559333	bam	6.2 GB
EGAF00002559334	bam	4.2 GB
EGAF00002559335	bam	2.1 GB
EGAF00002559336	bam	5.9 GB
EGAF00002559353	bam	7.1 GB
113 Files (474.8 GB)