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Dataset

sWGS for genome-wide copy number profiling

Dataset ID	Technology	Samples
EGAD00001006384	Illumina MiSeq,NextSeq 550	45

Dataset Description

Shallow whole-genome sequencing (sWGS) data for the identification of somatic copy number alterations (SCNA) and the estimation of tumor fractions in plasma DNA of metastatic colorectal cancer patients (mCRC).

Data Use Conditions

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Label	Code	Version	Modifier
disease specific research	DUO:0000007	2019-01-07	MONDO:0005575

Who controls access to this dataset

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact:

DAC CTC - Plasma-DNA
Contact person: Ellen Heitzer
Email: ellen [dot] heitzer [at] medunigraz [dot] at
More details: EGAC00001000072

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This dataset is featured in 1 study

Studies are experimental investigations of a particular phenomenon. e.g. case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients. Click on one of the Study IDs below to find out more.

Study ID	Study Title	Study Type
EGAS00001004491	A higher ctDNA fraction decreases survival in regorafenib-treated metastatic colorectal cancer patients	Other

EGA Beacon