Need Help?

Long-read data (PacBio)

The goal of this project was to perform long-read RNA sequencing (LR-seq, PacBio) in combination with short-read RNA-seq for systematic characterization of the isoform diversity in primary breast tumor samples. We sequenced the full-length transcriptomes of 26 breast tumors and 4 normal breast samples.

Request Access

This Data Access Agreement governs the terms on which access will be granted to the data in this submission which are available through the European Genome-phenome Archive (EGA) and provided by The Jackson Laboratory.

Process to obtain datasets generated by The Jackson Laboratory which are available through the European Genome-phenome Archive (EGA): Please submit your full name, supervisor's name if applicable, Institution's name and detailed research aims (internal non-commercial research) with your online request for review by the Data Access Committee (DAC). This dataset is governed by a Data Access Agreement which will be sent to your institutional email for review and signature by your Institution's Legal representative upon approval of your research aims by the DAC. Access will be granted to qualified researchers. Any questions, contact data_access@jax.org.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001004819 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00004842550 fastq.gz 250.7 MB
EGAF00004842551 fastq.gz 97.2 MB
EGAF00004842552 fastq.gz 191.7 MB
EGAF00004842553 fastq.gz 368.1 MB
EGAF00004842554 fastq.gz 167.6 MB
EGAF00004842555 fastq.gz 432.3 MB
EGAF00004842556 fastq.gz 71.1 MB
EGAF00004842557 fastq.gz 100.6 MB
EGAF00004842558 fastq.gz 149.7 MB
EGAF00004842559 fastq.gz 337.3 MB
EGAF00004842560 fastq.gz 405.9 MB
EGAF00004842561 fastq.gz 648.5 MB
EGAF00004842562 fastq.gz 413.2 MB
EGAF00004842563 fastq.gz 381.3 MB
EGAF00004842564 fastq.gz 746.8 MB
EGAF00004842565 fastq.gz 560.2 MB
EGAF00004842566 fastq.gz 376.3 MB
EGAF00004842567 fastq.gz 332.4 MB
EGAF00004842568 fastq.gz 751.2 MB
EGAF00004842569 fastq.gz 1.3 GB
EGAF00004842570 fastq.gz 430.8 MB
EGAF00004842571 fastq.gz 1.5 GB
EGAF00004842572 fastq.gz 1.4 GB
EGAF00004842573 fastq.gz 573.1 MB
EGAF00004842574 fastq.gz 2.0 GB
EGAF00004842575 fastq.gz 320.1 MB
EGAF00004842576 fastq.gz 2.0 GB
EGAF00004842577 fastq.gz 254.1 MB
EGAF00004842578 fastq.gz 640.6 MB
EGAF00004842579 fastq.gz 1.5 GB
EGAF00004842580 fastq.gz 1.5 GB
EGAF00004842581 fastq.gz 2.3 GB
EGAF00004842582 fastq.gz 345.2 MB
EGAF00004842583 fastq.gz 1.6 GB
EGAF00004842584 fastq.gz 681.5 MB
EGAF00004842585 fastq.gz 1.8 GB
EGAF00004842586 fastq.gz 77.5 MB
EGAF00004842587 fastq.gz 797.5 MB
EGAF00004842588 fastq.gz 346.1 MB
EGAF00004842589 fastq.gz 861.8 MB
EGAF00004842590 fastq.gz 817.3 MB
EGAF00004842591 fastq.gz 883.9 MB
EGAF00004842592 fastq.gz 876.9 MB
EGAF00004842593 fastq.gz 803.2 MB
EGAF00004842594 fastq.gz 478.3 MB
EGAF00004842595 fastq.gz 832.4 MB
46 Files (33.5 GB)