Study
Long-read and short-read isoform sequencing in breast cancer
Study ID | Alternative Stable ID | Type |
---|---|---|
EGAS00001004819 | Other |
Study Description
The goal of this project was to perform long-read RNA sequencing (LR-seq, PacBio) in combination with short-read RNA-seq for systematic characterization of the isoform diversity in primary breast tumor samples. We sequenced the full-length transcriptomes of 26 breast tumors and 4 normal breast samples.
Study Datasets 3 datasets.
Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data
Dataset ID | Description | Technology | Samples |
---|---|---|---|
EGAD00001006596 |
The goal of this project was to perform long-read RNA sequencing (LR-seq, PacBio) in combination with short-read RNA-seq for systematic characterization of the isoform diversity in primary breast tumor samples. We sequenced the full-length transcriptomes of 26 breast tumors and 4 normal breast samples.
|
NextSeq 500 | 25 |
EGAD00001006597 |
The goal of this project was to perform long-read RNA sequencing (LR-seq, PacBio) in combination with short-read RNA-seq for systematic characterization of the isoform diversity in primary breast tumor samples. We sequenced the full-length transcriptomes of 26 breast tumors and 4 normal breast samples.
|
PacBio RS II,Sequel | 26 |
EGAD00001009514 |
These are the raw subreads bam files for the pacbio IsoSeq data
|
NextSeq 500,PacBio RS II,Sequel | 30 |
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