Long-read and short-read isoform sequencing in breast cancer
The goal of this project was to perform long-read RNA sequencing (LR-seq, PacBio) in combination with short-read RNA-seq for systematic characterization of the isoform diversity in primary breast tumor samples. We sequenced the full-length transcriptomes of 26 breast tumors and 4 normal breast samples.
- Type: Other
- Archiver: EGA European Genome-Phenome Archive
Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data
|EGAD00001006597||PacBio RS II Sequel||26|
|EGAD00001009514||NextSeq 500 PacBio RS II Sequel||30|
A comprehensive long-read isoform analysis platform and sequencing resource for breast cancer.
Sci Adv 8: 2022 eabg6711
A widespread length-dependent splicing dysregulation in cancer.
Sci Adv 8: 2022 eabn9232