About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Single-cell RNA-seq data of bronchoalveolar lavage (BAL) fluid in severe COVID-19 and SARS-CoV-2 stimulated classical blood monocytes

We performed single-cell RNA-sequencing of cells in the bronchoalveolar lavage (BAL) fluid of severe COVID-19. In addition, we performed single-cell RNA-sequencing of SARS-CoV-2 stimulated classical blood monocytes. This study provides detailed insights into the alveolar macrophage response to SARS-CoV-2 infection and reveals a profibrotic macrophage response in severe COVID-19 patients.

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Data access policy for single-cell RNA-seq data of bronchoalveolar lavage (BAL) fluid in severe COVID-19 and SARS-CoV-2 stimulated classical blood monocytes.

Access to data generated is made available by completing the data access agreement for review by the data access committee and will be granted exclusively to qualified investigators for appropriate use.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001004928 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00004962667 fastq.gz 47.8 GB Report
EGAF00004962668 fastq.gz 108.6 GB Report
EGAF00004962669 fastq.gz 10.9 GB Report
EGAF00004962670 fastq.gz 25.3 GB Report
EGAF00004962671 fastq.gz 11.6 GB Report
EGAF00004962672 fastq.gz 26.9 GB Report
EGAF00004962673 fastq.gz 10.6 GB Report
EGAF00004962674 fastq.gz 24.6 GB Report
EGAF00004962675 fastq.gz 8.5 GB Report
EGAF00004962676 fastq.gz 20.1 GB Report
EGAF00004962677 fastq.gz 6.6 GB Report
EGAF00004962678 fastq.gz 15.4 GB Report
EGAF00004962679 fastq.gz 10.2 GB Report
EGAF00004962680 fastq.gz 24.4 GB Report
EGAF00004962681 fastq.gz 9.1 GB Report
EGAF00004962682 fastq.gz 15.8 GB Report
EGAF00004962683 fastq.gz 5.2 GB Report
EGAF00004962684 fastq.gz 8.8 GB Report
EGAF00004962685 fastq.gz 38.1 GB Report
EGAF00004962686 fastq.gz 89.2 GB Report
EGAF00004962687 csv 3.0 kB
21 Files (518.0 GB)