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Dataset

Illumina 5'end RNA sequencing

Dataset ID	Technology	Samples
EGAD00001006838	NextSeq 550	100

Dataset Description

The dataset contains 200 fastq files of Illumina 5'end RNA sequencing data of 50 PBMC samples. The paired-end data includes 100 fastq files (R1 and R2) of 50 full-length cDNA sequencing libraries and 100 fastq files (R1 and R2) of 50 HLA amplicon sequencing libraries.

Data Use Conditions

PS RUO NPU COL US

See further information on Data Use Conditions

Label	Code	Version
project specific restriction	DUO:0000027	2019-01-07
obsolete research use only	DUO:0000014	2019-01-07
not for profit, non commercial use only	DUO:0000018	2019-01-07
collaboration required	DUO:0000020	2019-01-07
user specific restriction	DUO:0000026	2019-01-07

Who controls access to this dataset

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact:

HLA RNAseq
Contact person: Jukka Partanen
Email: jukka [dot] partanen [at] veripalvelu [dot] fi
More details: EGAC00001001888

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This dataset is featured in 1 study

Studies are experimental investigations of a particular phenomenon. e.g. case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients. Click on one of the Study IDs below to find out more.

Study ID	Study Title	Study Type
EGAS00001004931	Illumina RNA sequencing for HLA expression qauntification	Other

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