About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Sequencing data for oesophageal and related samples - Nowicki-Osuch, Zhuang et al (WGS)

Data supporting: “Deep molecular phenotyping reveals the identity of Barrett’s esophagus and its malignant transition.” Nowicki-Osuch, Zhuang et al. WGS (BAM files) 5 Barrett's samples 5 normal oesophageal samples 5 normal gastric cardia samples 5 normal duodenal samples

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DUO:0000006
version: 2021-02-23

health or medical or biomedical research

This data use permission indicates that use is allowed for health/medical/biomedical purposes; does not include the study of population origins or ancestry.

DUO:0000018
version: 2021-02-23

not for profit, non commercial use only

This data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.

DUO:0000027
version: 2021-02-23

project specific restriction

This data use modifier indicates that use is limited to use within an approved project.

DUO:0000042
version: 2021-02-23

general research use

This data use permission indicates that use is allowed for general research use for any research purpose.

ICGC Data Access

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001000723 Other
EGAS00001000726 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00001415399 bam 57.9 GB Report
EGAF00001415401 bam 66.2 GB Report
EGAF00001415426 bam 136.6 GB Report
EGAF00001415428 bam 126.9 GB Report
EGAF00001680677 bam 74.8 GB Report
EGAF00001680750 bam 152.1 GB Report
EGAF00002549987 bam 130.7 GB Report
EGAF00002550009 bam 128.5 GB Report
EGAF00002550033 bam 64.6 GB Report
EGAF00002550056 bam 66.4 GB Report
EGAF00004972399 bam 77.1 GB Report
EGAF00004972400 bam 75.0 GB Report
EGAF00004972401 bam 67.9 GB Report
EGAF00004972402 bam 75.7 GB Report
EGAF00004972403 bam 73.2 GB Report
EGAF00004972404 bam 76.5 GB Report
EGAF00004972405 bam 71.9 GB Report
EGAF00004972406 bam 77.8 GB Report
EGAF00004972407 bam 70.8 GB Report
EGAF00004972408 bam 79.8 GB Report
20 Files (1.8 TB)