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Somatic copy-number alterations in plasma circulating tumor DNA from advanced EGFR-mutated lung adenocarcinoma patients

This is the raw data obtained from shallow whole-genome sequencing of plasma DNA (plasma-seq) for calling of somatic copy number alterations as well as focal amplifications from patients with lung cancer.

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Whole-genome sequencing cfDNA

European Genome-Phenome Archive c/o European Bioinformatics Institute Wellcome Trust Genome Campus Hinxton Cambridge CB10 1SD United Kingdom To whom it may concern, This document refers to the study EGAS00001003206 which has been submitted to the European Genome Archive (EGA) for the restricted access by legitimate academic institutions that have agreed to comply with the terms of a Data Access Agreement drafted by Ellen Heitzer. There are a number of steps that a researcher must take to obtain access to this data and the process is overseen by Ellen Heitzer Ellen Heitzer is authorized to approve researchers to have encrypted access to the data submitted to the EGA. Please be advised that Ellen Heitzer (ellen.heitzer@medunigraz.at) is authorized to upload data to the EGA for archiving and distribution as part of your submission process, which will enable approved researchers to have encrypted access to the data. We can confirm that this submission is consistent with the informed consent of the participants of the study or has been granted ethical approval and is in accordance with the applicable laws and regulations.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001004539 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00004914316 fastq.gz 255.9 MB
EGAF00004914317 fastq.gz 228.3 MB
EGAF00004914318 fastq.gz 424.6 MB
EGAF00004914319 fastq.gz 307.3 MB
EGAF00004914320 fastq.gz 313.4 MB
EGAF00004914321 fastq.gz 375.4 MB
EGAF00004914322 fastq.gz 375.0 MB
EGAF00004914323 fastq.gz 341.9 MB
EGAF00004914324 fastq.gz 385.8 MB
EGAF00004914325 fastq.gz 1.3 GB
EGAF00004914326 fastq.gz 231.4 MB
EGAF00004914327 fastq.gz 357.6 MB
EGAF00004914328 fastq.gz 248.8 MB
EGAF00004914329 fastq.gz 373.0 MB
EGAF00004914330 fastq.gz 291.4 MB
EGAF00004914331 fastq.gz 330.1 MB
EGAF00004914332 fastq.gz 299.6 MB
EGAF00004914333 fastq.gz 377.2 MB
EGAF00004914334 fastq.gz 306.3 MB
EGAF00004914335 fastq.gz 320.5 MB
EGAF00004914336 fastq.gz 314.6 MB
EGAF00004914337 fastq.gz 363.6 MB
EGAF00004914338 fastq.gz 378.8 MB
EGAF00004914339 fastq.gz 364.1 MB
EGAF00004914340 fastq.gz 433.7 MB
EGAF00004914341 fastq.gz 328.4 MB
EGAF00004914342 fastq.gz 325.9 MB
EGAF00004914343 fastq.gz 201.7 MB
EGAF00004914344 fastq.gz 387.5 MB
EGAF00004914345 fastq.gz 381.6 MB
EGAF00004914346 fastq.gz 335.9 MB
EGAF00004914347 fastq.gz 287.8 MB
EGAF00004914348 fastq.gz 294.8 MB
EGAF00004914349 fastq.gz 332.2 MB
EGAF00004914350 fastq.gz 630.9 MB
EGAF00004914351 fastq.gz 371.2 MB
EGAF00004914352 fastq.gz 300.1 MB
EGAF00004914353 fastq.gz 676.2 MB
EGAF00004914354 fastq.gz 309.9 MB
EGAF00004914355 fastq.gz 311.8 MB
EGAF00004914356 fastq.gz 376.5 MB
EGAF00004914357 fastq.gz 298.7 MB
EGAF00004914358 fastq.gz 407.6 MB
EGAF00004914359 fastq.gz 164.7 MB
EGAF00004914360 fastq.gz 315.1 MB
EGAF00004914361 fastq.gz 288.3 MB
EGAF00004914362 fastq.gz 338.6 MB
EGAF00004914363 fastq.gz 368.5 MB
EGAF00004914364 fastq.gz 388.3 MB
EGAF00004914365 fastq.gz 394.6 MB
EGAF00004914366 fastq.gz 316.0 MB
EGAF00004914367 fastq.gz 320.2 MB
EGAF00004914368 fastq.gz 378.7 MB
EGAF00004914369 fastq.gz 180.2 MB
EGAF00004914370 fastq.gz 230.0 MB
EGAF00004914371 fastq.gz 373.8 MB
EGAF00004914372 fastq.gz 318.7 MB
EGAF00004914373 fastq.gz 392.6 MB
EGAF00004914374 fastq.gz 233.3 MB
EGAF00004914375 fastq.gz 280.9 MB
EGAF00004914376 fastq.gz 287.8 MB
EGAF00004914377 fastq.gz 800.3 MB
EGAF00004914378 fastq.gz 271.6 MB
EGAF00004914379 fastq.gz 260.2 MB
64 Files (22.7 GB)