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As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Somatic copy-number alterations in plasma circulating tumor DNA from advanced EGFR-mutated lung adenocarcinoma patients

This is the raw data obtained from shallow whole-genome sequencing of plasma DNA (plasma-seq) for calling of somatic copy number alterations as well as focal amplifications from patients with lung cancer.

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DUO:0000007
version: 2019-01-07

disease specific research

This data use permission indicates that use is allowed provided it is related to the specified disease.

ModifiersMONDO:0005575

Whole-genome sequencing cfDNA

European Genome-Phenome Archive c/o European Bioinformatics Institute Wellcome Trust Genome Campus Hinxton Cambridge CB10 1SD United Kingdom To whom it may concern, This document refers to the study EGAS00001003206 which has been submitted to the European Genome Archive (EGA) for the restricted access by legitimate academic institutions that have agreed to comply with the terms of a Data Access Agreement drafted by Ellen Heitzer. There are a number of steps that a researcher must take to obtain access to this data and the process is overseen by Ellen Heitzer Ellen Heitzer is authorized to approve researchers to have encrypted access to the data submitted to the EGA. Please be advised that Ellen Heitzer (ellen.heitzer@medunigraz.at) is authorized to upload data to the EGA for archiving and distribution as part of your submission process, which will enable approved researchers to have encrypted access to the data. We can confirm that this submission is consistent with the informed consent of the participants of the study or has been granted ethical approval and is in accordance with the applicable laws and regulations.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001004539 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00004914316 fastq.gz 255.9 MB Report
EGAF00004914317 fastq.gz 228.3 MB Report
EGAF00004914318 fastq.gz 424.6 MB Report
EGAF00004914319 fastq.gz 307.3 MB Report
EGAF00004914320 fastq.gz 313.4 MB Report
EGAF00004914321 fastq.gz 375.4 MB Report
EGAF00004914322 fastq.gz 375.0 MB Report
EGAF00004914323 fastq.gz 341.9 MB Report
EGAF00004914324 fastq.gz 385.8 MB Report
EGAF00004914325 fastq.gz 1.3 GB Report
EGAF00004914326 fastq.gz 231.4 MB Report
EGAF00004914327 fastq.gz 357.6 MB Report
EGAF00004914328 fastq.gz 248.8 MB Report
EGAF00004914329 fastq.gz 373.0 MB Report
EGAF00004914330 fastq.gz 291.4 MB Report
EGAF00004914331 fastq.gz 330.1 MB Report
EGAF00004914332 fastq.gz 299.6 MB Report
EGAF00004914333 fastq.gz 377.2 MB Report
EGAF00004914334 fastq.gz 306.3 MB Report
EGAF00004914335 fastq.gz 320.5 MB Report
EGAF00004914336 fastq.gz 314.6 MB Report
EGAF00004914337 fastq.gz 363.6 MB Report
EGAF00004914338 fastq.gz 378.8 MB Report
EGAF00004914339 fastq.gz 364.1 MB Report
EGAF00004914340 fastq.gz 433.7 MB Report
EGAF00004914341 fastq.gz 328.4 MB Report
EGAF00004914342 fastq.gz 325.9 MB Report
EGAF00004914343 fastq.gz 201.7 MB Report
EGAF00004914344 fastq.gz 387.5 MB Report
EGAF00004914345 fastq.gz 381.6 MB Report
EGAF00004914346 fastq.gz 335.9 MB Report
EGAF00004914347 fastq.gz 287.8 MB Report
EGAF00004914348 fastq.gz 294.8 MB Report
EGAF00004914349 fastq.gz 332.2 MB Report
EGAF00004914350 fastq.gz 630.9 MB Report
EGAF00004914351 fastq.gz 371.2 MB
EGAF00004914352 fastq.gz 300.1 MB
EGAF00004914353 fastq.gz 676.2 MB Report
EGAF00004914354 fastq.gz 309.9 MB Report
EGAF00004914355 fastq.gz 311.8 MB Report
EGAF00004914356 fastq.gz 376.5 MB Report
EGAF00004914357 fastq.gz 298.7 MB Report
EGAF00004914358 fastq.gz 407.6 MB Report
EGAF00004914359 fastq.gz 164.7 MB Report
EGAF00004914360 fastq.gz 315.1 MB Report
EGAF00004914361 fastq.gz 288.3 MB Report
EGAF00004914362 fastq.gz 338.6 MB Report
EGAF00004914363 fastq.gz 368.5 MB Report
EGAF00004914364 fastq.gz 388.3 MB Report
EGAF00004914365 fastq.gz 394.6 MB Report
EGAF00004914366 fastq.gz 316.0 MB Report
EGAF00004914367 fastq.gz 320.2 MB Report
EGAF00004914368 fastq.gz 378.7 MB Report
EGAF00004914369 fastq.gz 180.2 MB Report
EGAF00004914370 fastq.gz 230.0 MB Report
EGAF00004914371 fastq.gz 373.8 MB Report
EGAF00004914372 fastq.gz 318.7 MB Report
EGAF00004914373 fastq.gz 392.6 MB Report
EGAF00004914374 fastq.gz 233.3 MB Report
EGAF00004914375 fastq.gz 280.9 MB Report
EGAF00004914376 fastq.gz 287.8 MB Report
EGAF00004914377 fastq.gz 800.3 MB Report
EGAF00004914378 fastq.gz 271.6 MB Report
EGAF00004914379 fastq.gz 260.2 MB Report
64 Files (22.7 GB)