Paired-end WGS data of 27 neuroblastoma patient samples (10 obtained at diagnosis, 6 at relapse and 11 matched blood samples as controls) used for detection of complex "seismic" amplification. Mean coverage is 24-55x per sample. The remaining patient samples of the dataset can be found under accession number EGAS00001001308.

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Dataset

Neuroblastoma WGS samples used for detection of seismic amplification

Dataset ID	Technology	Samples
EGAD00001007807	HiSeq X Ten,Illumina HiSeq 2000,Illumina NovaSeq 6000	27

Dataset Description

Paired-end WGS data of 27 neuroblastoma patient samples (10 obtained at diagnosis, 6 at relapse and 11 matched blood samples as controls) used for detection of complex "seismic" amplification. Mean coverage is 24-55x per sample. The remaining patient samples of the dataset can be found under accession number EGAS00001001308.

Data Use Conditions

HMB PUB US

See further information on Data Use Conditions

Label	Code	Version
health or medical or biomedical research	DUO:0000006	2019-01-07
publication required	DUO:0000019	2019-01-07
user specific restriction	DUO:0000026	2019-01-07

Who controls access to this dataset

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact:

DAC University Hospital Cologne
Contact person: Matthias Fischer
Email: matthias [dot] fischer [at] uk-koeln [dot] de
Access information:
More details: EGAC00001000361

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This dataset is featured in 1 study

Studies are experimental investigations of a particular phenomenon. e.g. case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients. Click on one of the Study IDs below to find out more.

Study ID	Study Title	Study Type
EGAS00001005424	Chromothripsis followed by circular recombination drives oncogene amplification in human cancer	Other

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