TCR sequencing of head and neck cancers

This data contains the TCR-beta sequences of 10 head and neck squamous carcinomas and 19 nasopharyngeal carcinomas. The library preparation method is a customised targeted amplification of the VDJ regions and is sequenced on the Illumina Miseq.

29 samples
DAC: EGAC00001002235
Technology: Illumina MiSeq

Access Policy1 Study Files

Metadata

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GRU DUO:0000042 (version: 2019-01-07)general research useThis data use permission indicates that use is allowed for general research use for any research purpose.

Policy

Data are available to all researchers upon request.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID	Study Title	Study Type
EGAS00001005480	Analysis of T-cell receptor clonotypes in tumor micro-environment identifies shared cancer type-specific signatures	Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID	File Type	Size
EGAF00005400917	fastq.gz	227.3 MB
EGAF00005400918	fastq.gz	316.7 MB
EGAF00005400919	fastq.gz	91.9 MB
EGAF00005400920	fastq.gz	126.1 MB
EGAF00005400921	fastq.gz	27.4 MB
EGAF00005400922	fastq.gz	41.5 MB
EGAF00005400923	fastq.gz	26.3 MB
EGAF00005400924	fastq.gz	38.5 MB
EGAF00005400925	fastq.gz	57.0 MB
EGAF00005400926	fastq.gz	81.5 MB
EGAF00005400927	fastq.gz	100.5 MB
EGAF00005400928	fastq.gz	149.2 MB
EGAF00005400929	fastq.gz	183.4 MB
EGAF00005400930	fastq.gz	260.1 MB
EGAF00005400931	fastq.gz	37.8 MB
EGAF00005400932	fastq.gz	56.1 MB
EGAF00005400933	fastq.gz	206.2 MB
EGAF00005400934	fastq.gz	293.2 MB
EGAF00005400935	fastq.gz	57.8 MB
EGAF00005400936	fastq.gz	114.6 MB
EGAF00005400937	fastq.gz	61.0 MB
EGAF00005400938	fastq.gz	98.4 MB
EGAF00005400939	fastq.gz	243.6 MB
EGAF00005400940	fastq.gz	337.6 MB
EGAF00005400941	fastq.gz	343.8 MB
EGAF00005400942	fastq.gz	492.2 MB
EGAF00005400943	fastq.gz	166.5 MB
EGAF00005400944	fastq.gz	246.8 MB
EGAF00005400945	fastq.gz	58.2 MB
EGAF00005400946	fastq.gz	82.2 MB
EGAF00005400947	fastq.gz	93.5 MB
EGAF00005400948	fastq.gz	134.3 MB
EGAF00005400949	fastq.gz	59.3 MB
EGAF00005400950	fastq.gz	79.2 MB
EGAF00005400951	fastq.gz	154.4 MB
EGAF00005400952	fastq.gz	220.8 MB
EGAF00005400953	fastq.gz	2.8 MB
EGAF00005400954	fastq.gz	3.6 MB
EGAF00005400955	fastq.gz	112.4 MB
EGAF00005400956	fastq.gz	166.1 MB
EGAF00005400957	fastq.gz	121.1 MB
EGAF00005400958	fastq.gz	172.6 MB
EGAF00005400959	fastq.gz	38.6 MB
EGAF00005400960	fastq.gz	49.6 MB
EGAF00005400961	fastq.gz	79.8 MB
EGAF00005400962	fastq.gz	105.3 MB
EGAF00005400963	fastq.gz	146.6 MB
EGAF00005400964	fastq.gz	210.1 MB
EGAF00005400965	fastq.gz	143.6 MB
EGAF00005400966	fastq.gz	194.5 MB
EGAF00005400967	fastq.gz	38.9 MB
EGAF00005400968	fastq.gz	56.5 MB
EGAF00005400969	fastq.gz	65.1 MB
EGAF00005400970	fastq.gz	98.1 MB
EGAF00005400971	fastq.gz	111.9 MB
EGAF00005400972	fastq.gz	162.2 MB
EGAF00005400973	fastq.gz	81.8 MB
EGAF00005400974	fastq.gz	123.3 MB
58 Files (7.6 GB)