IMCISION RNAseq

RNA sequencing of 32 primary head and neck squamous cell carcinoma (HNSCC) samples prior to treatment with neoadjuvant anti-PD-1 (n=6) or anti-PD-1 + anti-CTLA-4 (n=26) immunotherapy, and 30 paired on-treatment HNSCC samples (i.e. after neoadjuvant immunotherapy). RNA quantity used: 10ng. Library Preparation Kit: SMART Stranded Total RNA Seq Kit (Takara). Sequencing parameters: NovaSeq 6000, 2x 100 bp. File type: fastQ

16/09/2021
62 samples
DAC: EGAC00001002231
Technology: Illumina NovaSeq 6000

Access Policy1 Study Files

Metadata

Request Access

Netherlands Cancer Institute

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID	Study Title	Study Type
EGAS00001005454	IMCISION RNAseq	Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID	File Type	Size	Quality Report
EGAF00005482529	fastq.gz	2.2 GB	Report
EGAF00005482530	fastq.gz	2.3 GB	Report
EGAF00005482531	fastq.gz	2.3 GB	Report
EGAF00005482532	fastq.gz	2.3 GB	Report
EGAF00005482533	fastq.gz	3.1 GB	Report
EGAF00005482534	fastq.gz	3.2 GB	Report
EGAF00005482543	fastq.gz	2.5 GB	Report
EGAF00005482544	fastq.gz	2.4 GB	Report
EGAF00005482547	fastq.gz	3.0 GB	Report
EGAF00005482548	fastq.gz	3.0 GB	Report
EGAF00005482549	fastq.gz	3.0 GB	Report
EGAF00005482550	fastq.gz	3.0 GB	Report
EGAF00005482559	fastq.gz	3.1 GB	Report
EGAF00005482560	fastq.gz	3.1 GB	Report
EGAF00005482561	fastq.gz	2.7 GB	Report
EGAF00005482562	fastq.gz	2.7 GB	Report
EGAF00005482565	fastq.gz	2.9 GB	Report
EGAF00005482566	fastq.gz	2.9 GB	Report
EGAF00005482573	fastq.gz	2.7 GB	Report
EGAF00005482574	fastq.gz	2.7 GB	Report
EGAF00005482579	fastq.gz	2.2 GB	Report
EGAF00005482580	fastq.gz	2.2 GB	Report
EGAF00005482583	fastq.gz	2.7 GB	Report
EGAF00005482584	fastq.gz	2.7 GB	Report
EGAF00005482589	fastq.gz	3.0 GB	Report
EGAF00005482590	fastq.gz	3.1 GB	Report
EGAF00005482593	fastq.gz	2.2 GB	Report
EGAF00005482594	fastq.gz	2.2 GB	Report
EGAF00005482595	fastq.gz	3.1 GB	Report
EGAF00005482596	fastq.gz	3.1 GB	Report
EGAF00005482597	fastq.gz	2.2 GB	Report
EGAF00005482598	fastq.gz	2.1 GB	Report
EGAF00005482599	fastq.gz	2.1 GB	Report
EGAF00005482600	fastq.gz	2.1 GB	Report
EGAF00005482607	fastq.gz	2.7 GB	Report
EGAF00005482608	fastq.gz	2.7 GB	Report
EGAF00005482613	fastq.gz	2.5 GB	Report
EGAF00005482614	fastq.gz	2.6 GB	Report
EGAF00005482615	fastq.gz	2.4 GB	Report
EGAF00005482616	fastq.gz	2.4 GB	Report
EGAF00005482617	fastq.gz	2.3 GB	Report
EGAF00005482618	fastq.gz	2.3 GB	Report
EGAF00005482637	fastq.gz	2.4 GB	Report
EGAF00005482638	fastq.gz	2.4 GB	Report
EGAF00005482639	fastq.gz	2.6 GB	Report
EGAF00005482640	fastq.gz	2.7 GB	Report
EGAF00005482641	fastq.gz	2.6 GB	Report
EGAF00005482642	fastq.gz	2.6 GB	Report
EGAF00005482649	fastq.gz	2.6 GB	Report
EGAF00005482650	fastq.gz	2.7 GB	Report
EGAF00005482651	fastq.gz	2.9 GB	Report
EGAF00005482652	fastq.gz	2.9 GB	Report
EGAF00005482653	fastq.gz	2.7 GB	Report
EGAF00005482654	fastq.gz	2.8 GB	Report
EGAF00005482655	fastq.gz	2.8 GB	Report
EGAF00005482656	fastq.gz	2.8 GB	Report
EGAF00005482663	fastq.gz	2.4 GB	Report
EGAF00005482664	fastq.gz	2.4 GB	Report
EGAF00005482665	fastq.gz	3.1 GB	Report
EGAF00005482666	fastq.gz	3.1 GB	Report
EGAF00005482669	fastq.gz	2.0 GB	Report
EGAF00005482670	fastq.gz	2.1 GB	Report
EGAF00005482671	fastq.gz	2.6 GB	Report
EGAF00005482672	fastq.gz	2.6 GB	Report
EGAF00005482673	fastq.gz	2.9 GB	Report
EGAF00005482674	fastq.gz	2.8 GB	Report
EGAF00005482687	fastq.gz	2.7 GB	Report
EGAF00005482688	fastq.gz	2.7 GB	Report
EGAF00005482693	fastq.gz	3.6 GB	Report
EGAF00005482694	fastq.gz	3.7 GB	Report
EGAF00005482695	fastq.gz	3.1 GB	Report
EGAF00005482696	fastq.gz	3.1 GB	Report
EGAF00005482709	fastq.gz	2.5 GB	Report
EGAF00005482710	fastq.gz	2.6 GB	Report
EGAF00005482711	fastq.gz	2.3 GB	Report
EGAF00005482712	fastq.gz	2.3 GB	Report
EGAF00005482713	fastq.gz	2.7 GB	Report
EGAF00005482714	fastq.gz	2.8 GB	Report
EGAF00005482715	fastq.gz	3.0 GB	Report
EGAF00005482716	fastq.gz	3.0 GB	Report
EGAF00005482717	fastq.gz	2.8 GB	Report
EGAF00005482718	fastq.gz	2.9 GB	Report
EGAF00005482719	fastq.gz	2.7 GB	Report
EGAF00005482720	fastq.gz	2.7 GB	Report
EGAF00005482723	fastq.gz	2.3 GB	Report
EGAF00005482724	fastq.gz	2.3 GB	Report
EGAF00005482727	fastq.gz	2.5 GB	Report
EGAF00005482728	fastq.gz	2.5 GB	Report
EGAF00005482731	fastq.gz	3.0 GB	Report
EGAF00005482732	fastq.gz	3.0 GB	Report
EGAF00005482733	fastq.gz	2.5 GB	Report
EGAF00005482734	fastq.gz	2.6 GB	Report
EGAF00005482735	fastq.gz	3.5 GB	Report
EGAF00005482736	fastq.gz	3.6 GB	Report
EGAF00005482737	fastq.gz	2.9 GB	Report
EGAF00005482738	fastq.gz	2.9 GB	Report
EGAF00005482739	fastq.gz	2.2 GB	Report
EGAF00005482740	fastq.gz	2.2 GB	Report
EGAF00005482741	fastq.gz	3.2 GB	Report
EGAF00005482742	fastq.gz	3.2 GB	Report
EGAF00005482743	fastq.gz	2.5 GB	Report
EGAF00005482744	fastq.gz	2.5 GB	Report
EGAF00005482745	fastq.gz	2.5 GB	Report
EGAF00005482746	fastq.gz	2.5 GB	Report
EGAF00005482747	fastq.gz	2.7 GB	Report
EGAF00005482748	fastq.gz	2.7 GB	Report
EGAF00005482749	fastq.gz	2.8 GB	Report
EGAF00005482750	fastq.gz	2.8 GB	Report
EGAF00005482751	fastq.gz	2.7 GB	Report
EGAF00005482752	fastq.gz	2.8 GB	Report
EGAF00005482753	fastq.gz	3.2 GB	Report
EGAF00005482754	fastq.gz	3.2 GB	Report
EGAF00005482767	fastq.gz	2.9 GB	Report
EGAF00005482768	fastq.gz	2.9 GB	Report
EGAF00005482769	fastq.gz	3.2 GB	Report
EGAF00005482770	fastq.gz	3.2 GB	Report
EGAF00005482771	fastq.gz	3.4 GB	Report
EGAF00005482772	fastq.gz	3.5 GB	Report
EGAF00005482773	fastq.gz	2.8 GB	Report
EGAF00005482774	fastq.gz	2.9 GB	Report
EGAF00005482775	fastq.gz	2.6 GB	Report
EGAF00005482776	fastq.gz	2.7 GB	Report
EGAF00005482777	fastq.gz	2.9 GB	Report
EGAF00005482778	fastq.gz	2.9 GB	Report
124 Files (338.0 GB)