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IMCISION RNAseq

RNA sequencing of 32 primary head and neck squamous cell carcinoma (HNSCC) samples prior to treatment with neoadjuvant anti-PD-1 (n=6) or anti-PD-1 + anti-CTLA-4 (n=26) immunotherapy, and 30 paired on-treatment HNSCC samples (i.e. after neoadjuvant immunotherapy). RNA quantity used: 10ng. Library Preparation Kit: SMART Stranded Total RNA Seq Kit (Takara). Sequencing parameters: NovaSeq 6000, 2x 100 bp. File type: fastQ

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Netherlands Cancer Institute

Netherlands Cancer Institute

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001005454 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00005482529 fastq.gz 2.2 GB
EGAF00005482530 fastq.gz 2.3 GB
EGAF00005482531 fastq.gz 2.3 GB
EGAF00005482532 fastq.gz 2.3 GB
EGAF00005482533 fastq.gz 3.1 GB
EGAF00005482534 fastq.gz 3.2 GB
EGAF00005482543 fastq.gz 2.5 GB
EGAF00005482544 fastq.gz 2.4 GB
EGAF00005482547 fastq.gz 3.0 GB
EGAF00005482548 fastq.gz 3.0 GB
EGAF00005482549 fastq.gz 3.0 GB
EGAF00005482550 fastq.gz 3.0 GB
EGAF00005482559 fastq.gz 3.1 GB
EGAF00005482560 fastq.gz 3.1 GB
EGAF00005482561 fastq.gz 2.7 GB
EGAF00005482562 fastq.gz 2.7 GB
EGAF00005482565 fastq.gz 2.9 GB
EGAF00005482566 fastq.gz 2.9 GB
EGAF00005482573 fastq.gz 2.7 GB
EGAF00005482574 fastq.gz 2.7 GB
EGAF00005482579 fastq.gz 2.2 GB
EGAF00005482580 fastq.gz 2.2 GB
EGAF00005482583 fastq.gz 2.7 GB
EGAF00005482584 fastq.gz 2.7 GB
EGAF00005482589 fastq.gz 3.0 GB
EGAF00005482590 fastq.gz 3.1 GB
EGAF00005482593 fastq.gz 2.2 GB
EGAF00005482594 fastq.gz 2.2 GB
EGAF00005482595 fastq.gz 3.1 GB
EGAF00005482596 fastq.gz 3.1 GB
EGAF00005482597 fastq.gz 2.2 GB
EGAF00005482598 fastq.gz 2.1 GB
EGAF00005482599 fastq.gz 2.1 GB
EGAF00005482600 fastq.gz 2.1 GB
EGAF00005482607 fastq.gz 2.7 GB
EGAF00005482608 fastq.gz 2.7 GB
EGAF00005482613 fastq.gz 2.5 GB
EGAF00005482614 fastq.gz 2.6 GB
EGAF00005482615 fastq.gz 2.4 GB
EGAF00005482616 fastq.gz 2.4 GB
EGAF00005482617 fastq.gz 2.3 GB
EGAF00005482618 fastq.gz 2.3 GB
EGAF00005482637 fastq.gz 2.4 GB
EGAF00005482638 fastq.gz 2.4 GB
EGAF00005482639 fastq.gz 2.6 GB
EGAF00005482640 fastq.gz 2.7 GB
EGAF00005482641 fastq.gz 2.6 GB
EGAF00005482642 fastq.gz 2.6 GB
EGAF00005482649 fastq.gz 2.6 GB
EGAF00005482650 fastq.gz 2.7 GB
EGAF00005482651 fastq.gz 2.9 GB
EGAF00005482652 fastq.gz 2.9 GB
EGAF00005482653 fastq.gz 2.7 GB
EGAF00005482654 fastq.gz 2.8 GB
EGAF00005482655 fastq.gz 2.8 GB
EGAF00005482656 fastq.gz 2.8 GB
EGAF00005482663 fastq.gz 2.4 GB
EGAF00005482664 fastq.gz 2.4 GB
EGAF00005482665 fastq.gz 3.1 GB
EGAF00005482666 fastq.gz 3.1 GB
EGAF00005482669 fastq.gz 2.0 GB
EGAF00005482670 fastq.gz 2.1 GB
EGAF00005482671 fastq.gz 2.6 GB
EGAF00005482672 fastq.gz 2.6 GB
EGAF00005482673 fastq.gz 2.9 GB
EGAF00005482674 fastq.gz 2.8 GB
EGAF00005482687 fastq.gz 2.7 GB
EGAF00005482688 fastq.gz 2.7 GB
EGAF00005482693 fastq.gz 3.6 GB
EGAF00005482694 fastq.gz 3.7 GB
EGAF00005482695 fastq.gz 3.1 GB
EGAF00005482696 fastq.gz 3.1 GB
EGAF00005482709 fastq.gz 2.5 GB
EGAF00005482710 fastq.gz 2.6 GB
EGAF00005482711 fastq.gz 2.3 GB
EGAF00005482712 fastq.gz 2.3 GB
EGAF00005482713 fastq.gz 2.7 GB
EGAF00005482714 fastq.gz 2.8 GB
EGAF00005482715 fastq.gz 3.0 GB
EGAF00005482716 fastq.gz 3.0 GB
EGAF00005482717 fastq.gz 2.8 GB
EGAF00005482718 fastq.gz 2.9 GB
EGAF00005482719 fastq.gz 2.7 GB
EGAF00005482720 fastq.gz 2.7 GB
EGAF00005482723 fastq.gz 2.3 GB
EGAF00005482724 fastq.gz 2.3 GB
EGAF00005482727 fastq.gz 2.5 GB
EGAF00005482728 fastq.gz 2.5 GB
EGAF00005482731 fastq.gz 3.0 GB
EGAF00005482732 fastq.gz 3.0 GB
EGAF00005482733 fastq.gz 2.5 GB
EGAF00005482734 fastq.gz 2.6 GB
EGAF00005482735 fastq.gz 3.5 GB
EGAF00005482736 fastq.gz 3.6 GB
EGAF00005482737 fastq.gz 2.9 GB
EGAF00005482738 fastq.gz 2.9 GB
EGAF00005482739 fastq.gz 2.2 GB
EGAF00005482740 fastq.gz 2.2 GB
EGAF00005482741 fastq.gz 3.2 GB
EGAF00005482742 fastq.gz 3.2 GB
EGAF00005482743 fastq.gz 2.5 GB
EGAF00005482744 fastq.gz 2.5 GB
EGAF00005482745 fastq.gz 2.5 GB
EGAF00005482746 fastq.gz 2.5 GB
EGAF00005482747 fastq.gz 2.7 GB
EGAF00005482748 fastq.gz 2.7 GB
EGAF00005482749 fastq.gz 2.8 GB
EGAF00005482750 fastq.gz 2.8 GB
EGAF00005482751 fastq.gz 2.7 GB
EGAF00005482752 fastq.gz 2.8 GB
EGAF00005482753 fastq.gz 3.2 GB
EGAF00005482754 fastq.gz 3.2 GB
EGAF00005482767 fastq.gz 2.9 GB
EGAF00005482768 fastq.gz 2.9 GB
EGAF00005482769 fastq.gz 3.2 GB
EGAF00005482770 fastq.gz 3.2 GB
EGAF00005482771 fastq.gz 3.4 GB
EGAF00005482772 fastq.gz 3.5 GB
EGAF00005482773 fastq.gz 2.8 GB
EGAF00005482774 fastq.gz 2.9 GB
EGAF00005482775 fastq.gz 2.6 GB
EGAF00005482776 fastq.gz 2.7 GB
EGAF00005482777 fastq.gz 2.9 GB
EGAF00005482778 fastq.gz 2.9 GB
124 Files (338.0 GB)