Dataset

Transcriptome: chondrosarcoma

Dataset ID Technology Samples
EGAD00001008699 Illumina HiSeq 2500 8

Dataset Description

Transcriptome sequencing of nine patients diagnosed with chondrosarcoma. cDNA was generated using the NuGEN Ovation RNA-Seq FFPE system. Total RNA was randomly primed and thermally sheared and the resulting cDNA fragment was amplified. The cDNA was then mechanically sheared using sonication to generate ~250 bp fragments. Sequencing libraries were generated using the NuGEN Ovation Ultralow System V2 library prep kit and sequenced on HiSeq2500 TruSeq v3.

Who controls access to this dataset

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact:

Chondrosarcoma DAC
Contact person: Andrew Futreal
Email: afutreal [at] mdanderson [dot] org
More details: EGAC00001002632

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