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Stromal and dendritic cells from lymph nodes: single-cell RNA-seq

Although cross-species transcriptional analysis has been generated for DCs, transcriptomic conservation between mouse and human FRCs at single-cell resolution has been unclear. To test whether GREM1+ FRCs might also play a role in DC homeostasis in humans, we performed scRNA-seq of CD45–PDPN+ stromal cells, as well as CD45+CD11c+ immune cells from healthy human LNs of three human donors. Data was generated using the 10x platform.

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Genentech Human LN Single-cell RNA-seq

”Human lymph node Single-cell RNA-seq was performed on sorted populations (CD45+CD11C+, CD45-PDPN+) from 3 donors”

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006211 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00006146996 fastq.gz 7.4 GB
EGAF00006146997 fastq.gz 26.7 GB
EGAF00006146998 fastq.gz 7.1 GB
EGAF00006146999 fastq.gz 24.8 GB
EGAF00006147000 fastq.gz 7.4 GB
EGAF00006147001 fastq.gz 26.7 GB
EGAF00006147002 fastq.gz 6.9 GB
EGAF00006147003 fastq.gz 24.5 GB
EGAF00006147004 fastq.gz 7.0 GB
EGAF00006147005 fastq.gz 24.1 GB
EGAF00006147006 fastq.gz 7.2 GB
EGAF00006147007 fastq.gz 25.7 GB
12 Files (195.4 GB)