Need Help?

HiC (chromosomal conformation capture) data for Oncogenic 3D genome conformations identify novel therapeutic targets in ependymoma

This dataset contains chromosomal conformation capture data from fourteen samples (eleven tumor samples and three tumor derived cell lines). Libraries were prepared using the Illumina TruSeq LT sequencing adaptors. Sequencing was performed on the HiSeq X or NovaSeq platforms resulting in 28 FASTQ files.

Request Access

Data Access Committee for DKFZ DACO B06x

This document specifies the policy for granting access to the European Genome-phenome Archive (EGA) secure Web based tools for managing data access permissions to the data stored in the EGA database. Access is granted to those Data Access Committee members named in this document Paul Flicek, head of Genes, Genomes and Variation. Conditions of access: The account holder will abide by all current and future policies of the EBI for computer use as well as computer use policies of the European Molecular Biology Laboratory (EMBL), of which the EBI is a part. All EGA specific policies and standard operating procedures (SOPs) must also be followed. All applicable policies will be provided to the authorized users. Method of access: The EBI will create a personal account for the authorized person. The account username and password together with a RSA key provide access to the secure EGA infrastructure. A separate document with detailed guidelines on how to access and use these tools is provided to each account holder. The EGA helpdesk provides training when needed. Review: All individuals access to the EGA user authorization tools will be reviewed annually by Paul Flicek. Any staff changes affecting the authorized person must be provided immediately to Paul Flicek ( Authorized Data Access Committee user: Dr. Ursula Weber German Cancer Research Center (DKFZ) Foundation under Public Law Im Neuenheimer Feld 580 69120 Heidelberg, Germany Supervisor of Authorized user: Prof. Dr. Peter Lichter Division of Molecular Genetics German Cancer Research Center (DKFZ) Foundation under Public Law Im Neuenheimer Feld 580 69120 Heidelberg, Germany. Prof. Dr. Stefan Pfister Division of Pediatric Neurooncology German Cancer Research Center (DKFZ) Foundation under Public Law Im Neuenheimer Feld 580 69120 Heidelberg, Germany.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001002696 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00006176505 fastq.gz 74.5 GB
EGAF00006176506 fastq.gz 81.0 GB
EGAF00006176507 fastq.gz 77.1 GB
EGAF00006176508 fastq.gz 84.1 GB
EGAF00006176509 fastq.gz 74.4 GB
EGAF00006176510 fastq.gz 80.9 GB
EGAF00006176511 fastq.gz 75.9 GB
EGAF00006176512 fastq.gz 81.1 GB
EGAF00006176513 fastq.gz 75.5 GB
EGAF00006176514 fastq.gz 82.3 GB
EGAF00006176515 fastq.gz 77.8 GB
EGAF00006176516 fastq.gz 83.7 GB
EGAF00006176517 fastq.gz 74.2 GB
EGAF00006176518 fastq.gz 81.1 GB
EGAF00006176519 fastq.gz 76.3 GB
EGAF00006176520 fastq.gz 82.5 GB
EGAF00006176521 fastq.gz 76.2 GB
EGAF00006176522 fastq.gz 82.5 GB
EGAF00006176523 fastq.gz 145.4 GB
EGAF00006176524 fastq.gz 163.9 GB
EGAF00006176525 fastq.gz 75.4 GB
EGAF00006176526 fastq.gz 83.2 GB
EGAF00006176527 fastq.gz 137.5 GB
EGAF00006176528 fastq.gz 157.0 GB
EGAF00006176529 fastq.gz 133.7 GB
EGAF00006176530 fastq.gz 145.2 GB
EGAF00006176531 fastq.gz 54.6 GB
EGAF00006176532 fastq.gz 55.3 GB
28 Files (2.6 TB)