About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Columbia Alzheimer's sample (white matter)

The Columbia Alzheimer’s dataset (white matter) consists of 24 white matter individuals (12 controls, 12 cases). A total of 12,000 estimated cells from each sample were loaded on the 10x Single Cell Next GEM G Chip. cDNA libraries were prepared using the Chromium Single Cell 3’ Library and Gel Bead v3 kit according to the manufacturer’s instructions. cDNA libraries were sequenced using the Illumina NovaSeq 6000 System and NovaSeq 6000 S2 Reagent Kit v1.5 (100 cycles), aiming at a sequencing depth of minimum 30K reads/nucleus.

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Roche DAC Neurogenomics

Please download the data access policy at the linked URL.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006345 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00006214251 fastq.gz 2.4 GB Report
EGAF00006214252 fastq.gz 6.6 GB Report
EGAF00006214253 fastq.gz 2.5 GB Report
EGAF00006214254 fastq.gz 7.2 GB Report
EGAF00006214255 fastq.gz 2.5 GB Report
EGAF00006214256 fastq.gz 7.6 GB Report
EGAF00006214257 fastq.gz 2.5 GB Report
EGAF00006214258 fastq.gz 7.5 GB Report
EGAF00006214259 fastq.gz 2.5 GB Report
EGAF00006214260 fastq.gz 7.2 GB Report
EGAF00006214261 fastq.gz 3.1 GB Report
EGAF00006214262 fastq.gz 9.2 GB Report
EGAF00006214263 fastq.gz 2.8 GB Report
EGAF00006214264 fastq.gz 8.1 GB Report
EGAF00006214265 fastq.gz 2.2 GB Report
EGAF00006214266 fastq.gz 6.2 GB Report
EGAF00006214267 fastq.gz 2.3 GB Report
EGAF00006214268 fastq.gz 6.9 GB Report
EGAF00006214269 fastq.gz 2.5 GB Report
EGAF00006214270 fastq.gz 7.1 GB Report
EGAF00006214271 fastq.gz 2.6 GB Report
EGAF00006214272 fastq.gz 7.6 GB Report
EGAF00006214273 fastq.gz 2.5 GB Report
EGAF00006214274 fastq.gz 7.2 GB Report
EGAF00006214275 fastq.gz 2.3 GB Report
EGAF00006214276 fastq.gz 6.2 GB Report
EGAF00006214277 fastq.gz 2.2 GB Report
EGAF00006214278 fastq.gz 6.4 GB Report
EGAF00006214279 fastq.gz 2.6 GB Report
EGAF00006214280 fastq.gz 7.5 GB Report
EGAF00006214281 fastq.gz 2.1 GB Report
EGAF00006214282 fastq.gz 6.1 GB Report
EGAF00006214283 fastq.gz 2.7 GB Report
EGAF00006214284 fastq.gz 7.6 GB Report
EGAF00006214285 fastq.gz 2.5 GB Report
EGAF00006214286 fastq.gz 7.1 GB Report
EGAF00006214287 fastq.gz 2.8 GB Report
EGAF00006214288 fastq.gz 8.0 GB Report
EGAF00006214289 fastq.gz 2.6 GB Report
EGAF00006214290 fastq.gz 7.7 GB Report
EGAF00006214291 fastq.gz 2.8 GB Report
EGAF00006214292 fastq.gz 7.8 GB Report
EGAF00006214293 fastq.gz 2.4 GB Report
EGAF00006214294 fastq.gz 7.2 GB Report
EGAF00006214295 fastq.gz 2.5 GB Report
EGAF00006214296 fastq.gz 7.7 GB Report
EGAF00006214297 fastq.gz 2.6 GB Report
EGAF00006214298 fastq.gz 7.3 GB Report
48 Files (235.8 GB)