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Columbia Alzheimer's sample (white matter)

The Columbia Alzheimer’s dataset (white matter) consists of 24 white matter individuals (12 controls, 12 cases). A total of 12,000 estimated cells from each sample were loaded on the 10x Single Cell Next GEM G Chip. cDNA libraries were prepared using the Chromium Single Cell 3’ Library and Gel Bead v3 kit according to the manufacturer’s instructions. cDNA libraries were sequenced using the Illumina NovaSeq 6000 System and NovaSeq 6000 S2 Reagent Kit v1.5 (100 cycles), aiming at a sequencing depth of minimum 30K reads/nucleus.

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Roche DAC Neurogenomics

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Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006345 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00006214251 fastq.gz 2.4 GB
EGAF00006214252 fastq.gz 6.6 GB
EGAF00006214253 fastq.gz 2.5 GB
EGAF00006214254 fastq.gz 7.2 GB
EGAF00006214255 fastq.gz 2.5 GB
EGAF00006214256 fastq.gz 7.6 GB
EGAF00006214257 fastq.gz 2.5 GB
EGAF00006214258 fastq.gz 7.5 GB
EGAF00006214259 fastq.gz 2.5 GB
EGAF00006214260 fastq.gz 7.2 GB
EGAF00006214261 fastq.gz 3.1 GB
EGAF00006214262 fastq.gz 9.2 GB
EGAF00006214263 fastq.gz 2.8 GB
EGAF00006214264 fastq.gz 8.1 GB
EGAF00006214265 fastq.gz 2.2 GB
EGAF00006214266 fastq.gz 6.2 GB
EGAF00006214267 fastq.gz 2.3 GB
EGAF00006214268 fastq.gz 6.9 GB
EGAF00006214269 fastq.gz 2.5 GB
EGAF00006214270 fastq.gz 7.1 GB
EGAF00006214271 fastq.gz 2.6 GB
EGAF00006214272 fastq.gz 7.6 GB
EGAF00006214273 fastq.gz 2.5 GB
EGAF00006214274 fastq.gz 7.2 GB
EGAF00006214275 fastq.gz 2.3 GB
EGAF00006214276 fastq.gz 6.2 GB
EGAF00006214277 fastq.gz 2.2 GB
EGAF00006214278 fastq.gz 6.4 GB
EGAF00006214279 fastq.gz 2.6 GB
EGAF00006214280 fastq.gz 7.5 GB
EGAF00006214281 fastq.gz 2.1 GB
EGAF00006214282 fastq.gz 6.1 GB
EGAF00006214283 fastq.gz 2.7 GB
EGAF00006214284 fastq.gz 7.6 GB
EGAF00006214285 fastq.gz 2.5 GB
EGAF00006214286 fastq.gz 7.1 GB
EGAF00006214287 fastq.gz 2.8 GB
EGAF00006214288 fastq.gz 8.0 GB
EGAF00006214289 fastq.gz 2.6 GB
EGAF00006214290 fastq.gz 7.7 GB
EGAF00006214291 fastq.gz 2.8 GB
EGAF00006214292 fastq.gz 7.8 GB
EGAF00006214293 fastq.gz 2.4 GB
EGAF00006214294 fastq.gz 7.2 GB
EGAF00006214295 fastq.gz 2.5 GB
EGAF00006214296 fastq.gz 7.7 GB
EGAF00006214297 fastq.gz 2.6 GB
EGAF00006214298 fastq.gz 7.3 GB
48 Files (235.8 GB)