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As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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SOX11+ and SOX11- mantle cell lymphoma cell lines RNAseq data

Fastq transcriptomic sequencing files from Z138 SOX11+ and JVM2 SOX11- mantle cell lymphoma (MCL) cell lines upon SOX11 knock out (KO) and ectopic overexpression, respectively. Dataset includes 3 samples of Z138-SOX11KO, 3 of Z138 control, 3 of JVM2 control and 3 of JVM2-SOX11 MCL cell lines.

Request Access

DUO:0000007
version: 2021-02-23

disease specific research

This data use permission indicates that use is allowed provided it is related to the specified disease.

ModifiersMONDO:0015759 MONDO:0005070

Once the request has been made through the EGA portal, please, download and complete the Data Access Agreement

Once the request has been made through the EGA portal, please, download and complete the Data Access Agreement. Once completed, send the document to: Silvia Ruiz-Gaspà (sruizg@recerca.clinic.cat).

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006613 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00007133906 fastq.gz 1.7 GB Report
EGAF00007133907 fastq.gz 1.5 GB Report
EGAF00007133908 fastq.gz 1.8 GB Report
EGAF00007133909 fastq.gz 1.6 GB Report
EGAF00007133910 fastq.gz 1.7 GB Report
EGAF00007133911 fastq.gz 2.0 GB Report
EGAF00007133926 fastq.gz 1.8 GB Report
EGAF00007133927 fastq.gz 1.7 GB Report
EGAF00007133928 fastq.gz 1.9 GB Report
EGAF00007133937 fastq.gz 1.8 GB Report
EGAF00007133938 fastq.gz 1.8 GB Report
EGAF00007133939 fastq.gz 1.8 GB Report
12 Files (21.1 GB)