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WGS of MAPKi acquired resistant samples from patients and PDX models

WGS of MAPKi acquired resistant samples from patients and PDX models

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1. The User Institution agrees to only use these Data for the purpose of the Project (described in Appendix II) and only for Research Purposes. The User Institution further agrees that it will only use these Data for Research Purposes which are within the limitations (if any) set out in Appendix I. 2. The User Institution agrees to preserve, at all times, the confidentiality of these Data. In particular, it undertakes not to use, or attempt to use these Data to compromise or otherwise infringe the confidentiality of information on Research Participants. Without prejudice to the generality of the foregoing, the User Institution agrees to use at least the measures set out in Appendix I to protect these Data. 3. The User Institution agrees to protect the confidentiality of Research Participants in any research papers or publications that they prepare by taking all reasonable care to limit the possibility of identification. 4. The User Institution agrees not to link or combine these Data to other information or archived data available in a way that could re-identify the Research Participants, even if access to that data has been formally granted to the User Institution or is freely available without restriction. 5. The User Institution agrees only to transfer or disclose these Data, in whole or part, or any material derived from these Data, to the Authorised Personnel. Should the User Institution wish to share these Data with an External Collaborator, the External Collaborator must complete a separate application for access to these Data. 6. The User Institution agrees that the Data Producers, and all other parties involved in the creation, funding or protection of these Data: a) make no warranty or representation, express or implied as to the accuracy, quality or comprehensiveness of these Data; b) exclude to the fullest extent permitted by law all liability for actions, claims, proceedings, demands, losses (including but not limited to loss of profit), costs, awards damages and payments made by the Recipient that may arise (whether directly or indirectly) in any way whatsoever from the Recipient’s use of these Data or from the unavailability of, or break in access to, these Data for whatever reason and; c) bear no responsibility for the further analysis or interpretation of these Data. 7. The User Institution agrees to follow the Fort Lauderdale Guidelines (http://www.wellcome.ac.uk/stellent/groups/corporatesite/@policy_communications/documents/web_document/wtd003207.pdf ) and the Toronto Statement (http://www.nature.com/nature/journal/v461/n7261/full/461168a.html). This includes but is not limited to recognising the contribution of the Data Producers and including a proper acknowledgement in all reports or publications resulting from the use of these Data. 8. The User Institution agrees to follow the Publication Policy in Appendix III. This includes respecting the moratorium period for the Data Producers to publish the first peer-reviewed report describing and analysing these Data. 9. The User Institution agrees not to make intellectual property claims on these Data and not to use intellectual property protection in ways that would prevent or block access to, or use of, any element of these Data, or conclusion drawn directly from these Data. 10. The User Institution can elect to perform further research that would add intellectual and resource capital to these data and decide to obtain intellectual property rights on these downstream discoveries. In this case, the User Institution agrees to implement licensing policies that will not obstruct further research and to follow the U.S. National Institutes of Health Best Practices for the Licensing of Genomic Inventions (2005) (https://www.icgc.org/files/daco/NIH_BestPracticesLicensingGenomicInventions_2005_en.pdf ) in conformity with the Organisation for Economic Co-operation and Development Guidelines for the Licensing of the Genetic Inventions (2006) (http://www.oecd.org/science/biotech/36198812.pdf ). 11. The User Institution agrees to destroy/discard the Data held, once it is no longer used for the Project, unless obliged to retain the data for archival purposes in conformity with audit or legal requirements. 12. The User Institution will notify XXXXX within 30 days of any changes or departures of Authorised Personnel. 13. The User Institution will notify XXXXX prior to any significant changes to the protocol for the Project. 14. The User Institution will notify XXXXX as soon as it becomes aware of a breach of the terms or conditions of this agreement. 15. XXXXX may terminate this agreement by written notice to the User Institution. If this agreement terminates for any reason, the User Institution will be required to destroy any Data held, including copies and backup copies. This clause does not prevent the User Institution from retaining these data for archival purpose in conformity with audit or legal requirements. 16. The User Institution accepts that it may be necessary for the Data Producers to alter the terms of this agreement from time to time. As an example, this may include specific provisions relating to the Data required by Data Producers other than XXXXX. In the event that changes are required, the Data Producers or their appointed agent will contact the User Institution to inform it of the changes and the User Institution may elect to accept the changes or terminate the agreement. 17. If requested, the User Institution will allow data security and management documentation to be inspected to verify that it is complying with the terms of this agreement. 18. The User Institution agrees to distribute a copy of these terms to the Authorised Personnel. The User Institution will procure that the Authorised Personnel comply with the terms of this agreement. 19. This agreement (and any dispute, controversy, proceedings or claim of whatever nature arising out of this agreement or its formation) shall be construed, interpreted and governed by the laws of England and Wales and shall be subject to the exclusive jurisdiction of the English courts.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006874 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00007829509 bam 11.8 GB
EGAF00007829510 bam 27.4 GB
EGAF00007829511 bam 29.0 GB
EGAF00007829512 bam 29.8 GB
EGAF00007829513 bam 26.0 GB
EGAF00007829514 bam 21.8 GB
EGAF00007829515 bam 35.4 GB
EGAF00007829516 bam 37.0 GB
EGAF00007829517 bam 35.2 GB
EGAF00007829518 bam 35.4 GB
EGAF00007829519 bam 45.3 GB
EGAF00007829520 bam 58.2 GB
EGAF00007829521 bam 51.7 GB
EGAF00007829522 bam 32.0 GB
EGAF00007829523 bam 33.4 GB
EGAF00007829524 bam 31.8 GB
EGAF00007829525 bam 26.2 GB
EGAF00007829526 bam 28.9 GB
EGAF00007829527 bam 28.7 GB
EGAF00007829528 bam 34.8 GB
EGAF00007829529 bam 31.2 GB
EGAF00007829530 bam 29.5 GB
EGAF00007829531 bam 30.1 GB
EGAF00007829532 bam 30.3 GB
EGAF00007829533 bam 31.9 GB
EGAF00007829534 bam 53.0 GB
EGAF00007829535 bam 51.4 GB
EGAF00007829536 bam 57.1 GB
EGAF00007829537 bam 58.1 GB
EGAF00007829538 bam 45.6 GB
EGAF00007829539 bam 56.6 GB
EGAF00007829540 bam 32.4 GB
EGAF00007829541 bam 30.6 GB
EGAF00007829542 bam 32.6 GB
EGAF00007829543 bam 30.5 GB
EGAF00007829544 bam 26.5 GB
EGAF00007829545 bam 23.6 GB
EGAF00007829546 bam 33.4 GB
EGAF00007829547 bam 30.0 GB
EGAF00007829548 bam 38.3 GB
EGAF00007829549 bam 28.9 GB
EGAF00007829550 bam 28.5 GB
EGAF00007829551 bam 34.6 GB
EGAF00007829552 bam 39.4 GB
EGAF00007829553 bam 39.0 GB
EGAF00007829554 bam 35.0 GB
EGAF00007829555 bam 23.9 GB
EGAF00007829556 bam 35.9 GB
EGAF00007829557 bam 29.7 GB
EGAF00007829558 bam 37.5 GB
EGAF00007829559 bam 35.1 GB
EGAF00007829560 bam 37.2 GB
EGAF00007829561 bam 47.0 GB
EGAF00007829562 bam 47.9 GB
EGAF00007829563 bam 49.3 GB
EGAF00007829564 bam 48.8 GB
EGAF00007829565 bam 51.6 GB
EGAF00007829566 bam 33.6 GB
EGAF00007829567 bam 34.1 GB
EGAF00007829568 bam 34.7 GB
EGAF00007829569 bam 39.8 GB
EGAF00007829570 bam 38.3 GB
EGAF00007829571 bam 57.0 GB
EGAF00007829572 bam 43.1 GB
EGAF00007829573 bam 62.4 GB
EGAF00007829574 bam 89.2 GB
EGAF00007829575 bam 100.2 GB
EGAF00007829576 bam 30.5 GB
EGAF00007829577 bam 26.3 GB
EGAF00007829578 bam 29.9 GB
EGAF00007829579 bam 42.8 GB
EGAF00007829580 bam 31.4 GB
EGAF00007829581 bam 49.2 GB
EGAF00007829582 bam 44.4 GB
EGAF00007829583 bam 58.5 GB
EGAF00007829584 bam 66.4 GB
EGAF00007829585 bam 65.1 GB
EGAF00007829586 bam 59.4 GB
EGAF00007829587 bam 60.0 GB
EGAF00007829588 bam 68.8 GB
EGAF00007829589 bam 29.1 GB
EGAF00007829590 bam 34.3 GB
EGAF00007829591 bam 34.9 GB
EGAF00007829592 bam 26.5 GB
EGAF00007829593 bam 25.6 GB
EGAF00007829594 bam 28.0 GB
EGAF00007829595 bam 33.7 GB
EGAF00007829596 bam 22.4 GB
EGAF00007829597 bam 36.8 GB
EGAF00007829598 bam 29.8 GB
EGAF00007829599 bam 31.4 GB
EGAF00007829600 bam 46.5 GB
EGAF00007829601 bam 30.7 GB
EGAF00007829602 bam 22.5 GB
EGAF00007829603 bam 43.4 GB
EGAF00007829604 bam 27.6 GB
EGAF00007829605 bam 28.5 GB
EGAF00007829606 bam 25.7 GB
EGAF00007829607 bam 23.5 GB
EGAF00007829608 bam 28.2 GB
EGAF00007829609 bam 26.0 GB
EGAF00007829610 bam 14.4 GB
EGAF00007829611 bam 25.1 GB
EGAF00007829612 bam 30.9 GB
104 Files (3.9 TB)