A developmental cell atlas of the human thyroid gland - RNA
The thyroid gland produces hormones essential for health from embryogenesis to adulthood. Thyroid disorders, including congenital hypothyroidism and thyroid carcinoma, are prevalent and pose significant health challenges. Congenital hypothyroidism often results from thyroid dysgenesis or impaired hormone synthesis, is particularly prevalent in trisomy 21 (T21), while thyroid carcinoma is the most frequent endocrine malignancy, affecting both paediatric and adult populations. Understanding the molecular basis of these conditions requires deeper insights into fetal thyroid development. We generated a spatiotemporal atlas of the human thyroid during early pregnancy, revealing key cell types, including hormone-producing thyrocytes. Thyroid follicular cells are heterogeneous, with two functional cell states (fTFC1, fTFC2) that persist into adulthood, with fTFC2 characterised by elevated PAX8 expression. We demonstrated that T21 thyroids displayed dysgenesis with disrupted follicular morphology, and altered extracellular matrix interactions, and that the fTFC2 signature was enriched in paediatric papillary thyroid cancer compared to adults. These findings uncover thyrocyte heterogeneity across the lifespan, advancing understanding of thyroid development and disease.
- 10/12/2024
- 1 sample
- DAC: EGAC00001000000
- Technology: Illumina NovaSeq 6000
DUO:0000019 version: 2021-02-23
publication required
This data use modifier indicates that requestor agrees to make results of studies using the data available to the larger scientific community.
DUO:0000026 version: 2021-02-23
user specific restriction
This data use modifier indicates that use is limited to use by approved users.
DUO:0000028 version: 2021-02-23
institution specific restriction
This data use modifier indicates that use is limited to use within an approved institution.
DUO:0000042 version: 2021-02-23
general research use
This data use permission indicates that use is allowed for general research use for any research purpose.
Wellcome Trust Sanger Institute Cancer Genome Group Data Sharing Policy
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001007524 | Transcriptome Analysis |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
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| EGAF00008630261 | cram | 1.4 GB |
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| EGAF00008630262 | cram | 1.4 GB |
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| EGAF00008630263 | cram | 1.6 GB |
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| EGAF00008630264 | cram | 1.6 GB |
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| EGAF00008630265 | cram | 1.6 GB |
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| EGAF00008630266 | cram | 1.6 GB |
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| EGAF00008630267 | cram | 1.1 GB |
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| EGAF00008630268 | cram | 1.4 GB |
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| EGAF00008630269 | cram | 1.4 GB |
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| EGAF00008630270 | cram | 1.1 GB |
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| EGAF00008630271 | cram | 1.8 GB |
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| EGAF00008630272 | cram | 1.2 GB |
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| EGAF00008630273 | cram | 1.2 GB |
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| EGAF00008630274 | cram | 1.4 GB |
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| EGAF00008630275 | cram | 1.4 GB |
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| EGAF00008630276 | cram | 1.5 GB |
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| EGAF00008630277 | cram | 1.4 GB |
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| EGAF00008630278 | cram | 1.5 GB |
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| EGAF00008630279 | cram | 1.5 GB |
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| EGAF00008630280 | cram | 1.0 GB |
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| EGAF00008630281 | cram | 1.3 GB |
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| EGAF00008630282 | cram | 1.3 GB |
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| EGAF00008630283 | cram | 1.2 GB |
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| EGAF00008630284 | cram | 1.7 GB |
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| EGAF00008630285 | cram | 1.2 GB |
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| EGAF00008630286 | cram | 1.1 GB |
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| EGAF00008630287 | cram | 3.5 GB |
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| EGAF00008630288 | cram | 3.7 GB |
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| EGAF00008630289 | cram | 3.5 GB |
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| EGAF00008630290 | cram | 3.5 GB |
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| EGAF00008630291 | cram | 3.9 GB |
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| EGAF00008630292 | cram | 3.5 GB |
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| EGAF00008630293 | cram | 3.7 GB |
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| EGAF00008630294 | cram | 3.5 GB |
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| EGAF00008630295 | cram | 3.5 GB |
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| EGAF00008630296 | cram | 3.9 GB |
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| 36 Files (72.3 GB) | ||||
