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Bulk RNA Seq in FAP Adenoma

Bulk RNASeq data of Duodenal organoids, sorted ILC3 and duodenal tissue

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Bulk RNA Seq of FAP Duodenum Adenoma

Data Access Agreement for Controlled Access Data University Hospital Bonn Germany Contact and Project Information A. Data Recipient (including contact details) Please ensure that a full postal address and a valid Institutional email address are included Name: Institution’s Legal Name: Institutional Postal Address: Institutional E-mail Address: Website of the Institution: B. Authorised Representative of the Data Recipient Name: Position: Affiliation: Institutional Postal Address: Institutional E-mail Address: C. Data Controller(s) (including contact details) Please ensure that a full postal address and a valid Institutional email address are included Name: Institution’s Legal Name: Institutional Postal Address: Institutional E-mail Address: Website of the Institution: D. Authorised Representative of the Data Controller(s) Name: Position: Affiliation: Institutional Postal Address: Institutional E-mail Address: E. Title of the Proposed Research Project F. Research Project (Scientific Abstract): Please provide a detailed description of the project, including its stakeholders, central question, and relevance to the research domain addressed. Furthermore, outline the project's specific objectives and duration. Be aware that any approved use of the data must be in accordance with the framework of the described project (maximum 300 words). G. Research Credentials Please provide a list of three publications relevant to the project description, where the Data Recipient is an author or co-author. Additionally, attach a brief curriculum vitae (CV) for the Data Recipient. If the Data Recipient has not authored or co-authored three relevant publications, please describe their pertinent expertise or experience in no more than 150 words. Additionally, provide information on how the research project will be executed (e.g., available funding, infrastructure, etc.). Terms and Conditions In signing this Agreement: 1. As the Data Recipient, you agree to use the Data solely for the purpose of the Project. 2. You commit to maintaining the confidentiality of information and Data related to Data Subjects at all times. You pledge not to use or attempt to use the Data in a way that compromises or infringes upon the confidentiality of information on Data Subjects and their right to privacy. 3. You agree not to attempt to identify Data Subjects. 4. You and your Authorized Personnel agree to adhere to any usage restrictions (if any) resulting from consent, i.e., the appropriate lawful basis for processing the Data, as well as any usage restrictions arising from your Institution's internal policies. 5. You agree to follow an up-to-date information technology (IT) policy when handling the Data, which must include at least the following items: a. Logging and auditing of access to the Data and the computer network; b. Password protection for the computer network and/or strong data encryption; c. Virus and malware protection for computers on the network; d. Secure backup procedures. 6. You acknowledge that access to the Data is granted for the duration of the Project described in Section I, as well as any new Project within the same research field or area. Any use of the Data for a Project in a different research field or area will require approval under a new Agreement. 7. You recognize that nothing in this Agreement transfers any intellectual property rights to the Data to you. 8. You agree not to make intellectual property claims on the Data and not to use intellectual property protection in ways that would prevent or restrict access to, or use of, any element of the Data. 9. You may choose to conduct additional research that contributes intellectual and resource capital to the Data, and opt to secure intellectual property rights for subsequent discoveries. In such cases, you agree to adopt licensing policies that do not hinder further research, adhering to the Organisation for Economic Co-operation and Development Guidelines. 10. You agree that the Research Project: 1) assumes no legal responsibility for the Data's accuracy or completeness; 2) accepts no liability for indirect, consequential, or incidental damages or losses resulting from the Data's use; and 3) takes no responsibility for further analysis or interpretation of the Data beyond what the Controller(s) have published. 11. You agree to hold the Data Subject(s) and Data Controller(s) harmless, and to defend and indemnify all parties against any liabilities, demands, damages, expenses, and losses arising from your use of the Data for any purpose. 12. You agree to a moratorium on publishing global analyses of the dataset until the Data Controller(s) have published their own global analysis, or twelve (12) months have passed from the time the Data were deposited, whichever comes first. You acknowledge that prompt publication or public disclosure of the Research Project results is encouraged, and agree not to disclose any results generated from the Data in your global analyses. 13. You commit to acknowledging the Data Controller(s)' contributions in all oral and written presentations, disclosures, and publications resulting from any Data analysis. 14. You agree to use the Data in your laboratory, with any Authorized Personnel working under your direct supervision. You also agree to distribute a copy of these terms to Authorized Personnel. 15. You may not transfer any information included in the Data to anyone, unless specifically designated in the Research Project or by prior written authorization from the Data Controller(s) responsible for the generation of the original Data. 16. You may not transfer the Data itself to anyone outside your Institution, unless the Controller(s) have approved such a transfer and its terms in writing. 17. If you wish to share the Data with an external collaborator, the collaborator must complete a separate Data Access Agreement. 18. You must ensure that all who have access to the Data, including you and your Authorized Personnel, are listed, made aware of, and bound by this Agreement's terms. You remain solely and fully responsible for your Authorized Personnel's non-compliance with the Agreement's provisions and/or applicable laws. 19. In the event of a security breach resulting from accidental use of Data by you and your Authorized Personnel, which leads to Data disclosure, you must report this to the Data Controller(s) within a maximum of 72 hours and comply with any relevant GDPR rules. 20. In the case of a non-accidental or minor breach of the Data Access Agreement by you, you will be required to destroy any Data held. 21. You accept that this Agreement will terminate immediately upon any breach by you or upon its termination (see Section I). 22. You endeavor to settle any disputes with the Data Controller(s) amicably. If you cannot reach an agreement, you will meet and negotiate in good faith to resolve the issue. If the issue remains unresolved within a reasonable period (e.g., 30 calendar days), both parties may submit it for resolution by an arbitrator. 23. Furthermore, the proceedings' language will be English unless otherwise agreed upon. The arbitration award will be final and binding on all parties concerned. 24. This Agreement (and any dispute, controversy, proceedings, or claim of any nature arising from it or its formation) shall be interpreted, governed by, and construed following the Laws of Germany and shall be subject to the exclusive jurisdiction of the german Courts. Agreement I have read, understood and agree to abide by the terms and conditions stipulated in this Data Access Agreement. Data Recipient or Authorised Representative of the Data Recipient: Name: Title and position (if applicable): Affiliation (if applicable): Signature: _____________________________________Date: _____________________ Data Controller(s) or Authorised Representative of the Data Controller(s): Name: Title and position (if applicable): Affiliation (if applicable): Signature: _____________________________________Date: ______________________

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006847 Other
EGAS00001007207 RNASeq
EGAS00001007347 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00007889284 fastq.gz 9.9 GB
EGAF00007889285 fastq.gz 24.5 GB
EGAF00007889286 fastq.gz 9.9 GB
EGAF00007889287 fastq.gz 24.6 GB
EGAF00007889288 fastq-031.gz 9.9 GB
EGAF00007889289 fastq.gz 24.6 GB
EGAF00007889290 fastq.gz 423.8 MB
EGAF00007889291 fastq.gz 913.6 MB
EGAF00007889292 fastq.gz 142.1 MB
EGAF00007889293 fastq.gz 221.8 MB
EGAF00007889294 fastq.gz 13.7 GB
EGAF00007889295 fastq.gz 33.3 GB
EGAF00007889296 fastq.gz 1.5 GB
EGAF00007889297 fastq.gz 3.3 GB
EGAF00007889298 fastq.gz 76.4 MB
EGAF00007889299 fastq.gz 116.2 MB
EGAF00007889300 fastq-001.gz 9.2 GB
EGAF00007889301 fastq.gz 21.6 GB
EGAF00007889302 fastq.gz 1.3 GB
EGAF00007889303 fastq-016.gz 2.9 GB
EGAF00007889304 fastq.gz 53.4 MB
EGAF00007889305 fastq.gz 68.6 MB
EGAF00007889306 fastq-009.gz 5.5 GB
EGAF00007889307 fastq-004.gz 13.0 GB
EGAF00007889308 fastq-006.gz 3.0 GB
EGAF00007889309 fastq-021.gz 6.5 GB
EGAF00007889310 fastq.gz 27.8 MB
EGAF00007889311 fastq.gz 30.9 MB
EGAF00007889312 fastq-002.gz 3.7 GB
EGAF00007889313 fastq-030.gz 8.7 GB
EGAF00008658720 fastq.gz 164.5 MB
EGAF00008658721 fastq.gz 410.3 MB
EGAF00008658722 fastq.gz 169.9 MB
EGAF00008658723 fastq.gz 1.2 MB
EGAF00008658724 fastq.gz 358.8 MB
EGAF00008658725 fastq.gz 283.5 MB
EGAF00008658726 fastq.gz 403.2 MB
EGAF00008658727 fastq.gz 286.9 MB
EGAF00008658728 fastq.gz 313.6 MB
EGAF00008658729 fastq.gz 359.3 MB
EGAF00008658730 fastq.gz 255.9 MB
EGAF00008658731 fastq.gz 229.6 MB
EGAF00008658732 fastq.gz 256.5 MB
EGAF00008658733 fastq.gz 159.9 MB
EGAF00008658734 fastq.gz 249.7 MB
EGAF00008658735 fastq.gz 259.9 MB
EGAF00008658736 fastq.gz 262.9 MB
EGAF00008658737 fastq.gz 268.6 MB
EGAF00008658738 fastq.gz 280.5 MB
EGAF00008658739 fastq.gz 214.0 MB
EGAF00008658740 fastq.gz 221.3 MB
EGAF00008658741 fastq.gz 56.3 MB
EGAF00008658742 fastq.gz 253.2 MB
EGAF00008658743 fastq.gz 290.1 MB
EGAF00008658744 fastq.gz 1.2 MB
EGAF00008658745 fastq.gz 301.7 MB
EGAF00008658746 fastq.gz 306.4 MB
EGAF00008658747 fastq.gz 162.7 MB
EGAF00008658748 fastq.gz 541.6 MB
EGAF00008658749 fastq.gz 358.3 MB
EGAF00008658750 fastq.gz 361.2 MB
EGAF00008658751 fastq.gz 534.3 MB
EGAF00008658752 fastq.gz 469.7 MB
EGAF00008658753 fastq.gz 365.8 MB
EGAF00008658754 fq.gz 585.0 MB
EGAF00008658755 fq.gz 788.4 MB
EGAF00008658756 fq.gz 661.2 MB
EGAF00008658757 fq.gz 610.0 MB
EGAF00008658758 fastq.gz 454.9 MB
EGAF00008658759 fastq.gz 222.5 MB
EGAF00008658760 fq.gz 577.1 MB
EGAF00008658761 fq.gz 628.2 MB
EGAF00008658762 fq.gz 700.1 MB
EGAF00008658763 fq.gz 669.9 MB
EGAF00008658764 fq.gz 626.9 MB
EGAF00008658765 fq.gz 865.4 MB
EGAF00008658766 fq.gz 607.8 MB
EGAF00008658767 fastq.gz 300.0 MB
EGAF00008658768 fq.gz 554.5 MB
EGAF00008658769 fq.gz 656.1 MB
EGAF00008658770 fq.gz 697.4 MB
EGAF00008658771 fq.gz 697.6 MB
EGAF00008658772 fq.gz 639.6 MB
EGAF00008658773 fq.gz 705.2 MB
EGAF00008658774 fq.gz 595.0 MB
EGAF00008658775 fq.gz 562.6 MB
EGAF00008658776 fq.gz 641.1 MB
EGAF00008658777 fq.gz 589.0 MB
EGAF00008658778 fq.gz 558.7 MB
EGAF00008658779 fq.gz 729.7 MB
EGAF00008658780 fq.gz 553.1 MB
EGAF00008658781 fastq.gz 551.1 MB
EGAF00008658782 fastq.gz 559.8 MB
EGAF00008658783 fastq.gz 322.7 MB
EGAF00008658784 fastq.gz 250.8 MB
EGAF00008658785 fastq.gz 572.7 MB
EGAF00008658786 fastq.gz 701.8 MB
EGAF00008658787 fastq.gz 1.2 GB
EGAF00008658788 fastq.gz 538.0 MB
EGAF00008658789 fastq.gz 432.4 MB
EGAF00008658790 fq.gz 598.9 MB
EGAF00008658791 fastq.gz 381.5 MB
EGAF00008658792 fastq.gz 668.0 MB
EGAF00008658793 fastq.gz 488.3 MB
EGAF00008658794 fastq.gz 690.2 MB
EGAF00008658795 fastq.gz 488.8 MB
EGAF00008658796 fq.gz 807.4 MB
EGAF00008658797 fastq.gz 512.6 MB
EGAF00008658798 fastq.gz 535.3 MB
EGAF00008658799 fastq.gz 416.0 MB
EGAF00008658800 fq.gz 570.8 MB
EGAF00008658801 fastq.gz 417.0 MB
EGAF00008658802 fastq.gz 432.0 MB
EGAF00008658803 fastq.gz 242.7 MB
EGAF00008658804 fastq.gz 466.8 MB
EGAF00008658805 fq.gz 756.0 MB
EGAF00008658806 fastq.gz 549.2 MB
EGAF00008658807 fq.gz 633.1 MB
EGAF00008658808 fq.gz 650.6 MB
EGAF00008658809 fastq.gz 1.3 GB
EGAF00008658810 fq.gz 543.6 MB
EGAF00008658811 fastq.gz 299.2 MB
EGAF00008658812 fastq.gz 389.7 MB
EGAF00008658813 fastq.gz 237.9 MB
EGAF00008658814 fastq.gz 350.9 MB
EGAF00008658815 fq.gz 704.7 MB
EGAF00008658816 fastq.gz 521.1 MB
EGAF00008658817 fastq.gz 501.4 MB
EGAF00008658818 fastq.gz 57.9 MB
EGAF00008658819 fastq.gz 309.7 MB
EGAF00008658820 fastq.gz 300.5 MB
EGAF00008658821 fastq.gz 435.0 MB
EGAF00008658822 fastq.gz 372.4 MB
EGAF00008658825 fastq.gz 312.5 MB
EGAF00008658826 fastq.gz 397.8 MB
EGAF00008658827 fastq.gz 417.5 MB
EGAF00008660250 fastq.gz 256.1 MB
EGAF00008660251 fastq.gz 370.0 MB
EGAF00008660252 fastq.gz 402.7 MB
EGAF00008660253 fq.gz 789.6 MB
EGAF00008660255 fastq.gz 351.1 MB
EGAF00008660256 fq.gz 693.4 MB
EGAF00008660257 fastq.gz 682.2 MB
EGAF00008660258 fastq.gz 401.1 MB
EGAF00008660259 fq.gz 533.0 MB
EGAF00008660260 fq.gz 645.1 MB
EGAF00008670400 fastq.gz 316.3 MB
EGAF00008670401 fastq.gz 309.4 MB
EGAF00008670402 fastq.gz 174.3 MB
EGAF00008670403 fastq.gz 510.2 kB
EGAF00008670404 fastq.gz 418.1 MB
EGAF00008670405 fastq.gz 175.0 MB
EGAF00008670406 fastq.gz 4.9 MB
EGAF00008670407 fastq.gz 4.9 MB
EGAF00008670408 fastq.gz 226.9 MB
EGAF00008670411 fastq.gz 313.7 MB
EGAF00008670412 fastq.gz 488.1 kB
EGAF00008670413 fastq.gz 315.1 MB
EGAF00008670414 fastq.gz 392.4 MB
EGAF00008670415 fastq.gz 221.1 MB
EGAF00008670421 fastq.gz 413.6 MB
EGAF00008670820 fastq.gz 421.2 MB
162 Files (290.4 GB)